Psychrobacillus sp. INOP01: KD050_11760
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Entry
KD050_11760 CDS
T09653
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KD050_11760 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyb03019
]
KD050_11760 (recQ)
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_11760 (recQ)
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KD050_11760 (recQ)
Messenger RNA biogenesis [BR:
psyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KD050_11760 (recQ)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KD050_11760 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
FIBL-2
HHH
Motif
Other DBs
NCBI-ProteinID:
QUG39997
LinkDB
All DBs
Position
2318340..2320106
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AA seq
588 aa
AA seq
DB search
MLDKARQLLQTYFGYDSFREGQETVINYVLDENSSLCVMPTGGGKSLCYQIPALMLEGTT
IVISPLISLMKDQVDTLIQAGIPATFINSTLTAEEVRKTMEEVQNGQYRLLYIAPERLES
PHFLNQLKKVKVPLIAVDEAHCISQWGHDFRPSYRAIHRLKEVFTEQPTVLALTATATPA
VRDDICRLLQIQEDNTVITGFARSNLAFSVVLGQDKNKFLKEFIKKNANEVGIIYAATRK
TVDLLYDLLNRAGIQTAKYHAGLPEAFRNKEQERFLTDEAQVMVATNAFGMGIDKSNVRY
VIHYQLPKNMESYYQEAGRAGRDGLPSECVVLYASQDVQTQRFLIDQAMDRERIPRELEK
LQGMVDYCHTENCLQQFIVTYFGESGATRCGQCGNCTDSREVQDVTKEVQMVLSCVVRMG
QRFGKTITAQVLTGSQNKKVVDFGFTKLSTYGILKGKSLKEVSGLMEFMIAEGLLSVNHG
SLPTIYVSDAGKEVLMGNRVVERKGVAVTKQIANNNPLFEKLRILRKKIADEAGVPPFVI
FSDKTLQHMCAERPQTEEQLLEIHGIGENKREKYGQAFLEEIHNYITV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgttagataaagcacgtcaattattacaaacttactttggatatgattcctttcgtgag
ggccaagaaacggttattaactatgtattggatgagaattctagcctttgtgtaatgcct
acagggggaggtaagtctctgtgctaccaaatccccgctcttatgctagaaggcactacg
attgttatctctccattaatttcccttatgaaagaccaggtggatacattaattcaggct
gggattcctgcaaccttcataaacagtacattaactgcagaagaagtaaggaaaacaatg
gaagaagtacaaaatggccaatatcgtttactttatatagctcccgagcgtttagaatct
cctcactttttaaatcaattaaaaaaagtaaaggttcctttaatagcagtggacgaggcg
cattgtatttcacaatggggtcacgatttccgtccaagctaccgggctattcatcgatta
aaggaagtatttactgagcaaccaactgtcctcgccttaactgctactgcaaccccagcg
gtgcgagatgatatatgtcgattgctacaaattcaagaggacaatacagttattactgga
tttgcaaggtccaatttagctttttcggtcgtattaggacaggataaaaataagttttta
aaagaatttattaaaaaaaatgcgaacgaagtaggaattatctatgctgctactagaaaa
acagtagatctgttatatgatttgctaaatagagcaggtattcagactgctaaatatcat
gcaggacttccagaggcatttcgaaataaggaacaagaacgtttcttaacagatgaagcg
caggtaatggttgcaaccaatgcatttggtatggggattgataaatccaatgtccgctat
gtgattcactatcagctgccgaagaatatggaaagctactatcaggaagccggaagagcg
ggacgagatggtttaccaagtgaatgtgtcgttttgtatgcatcccaagacgttcaaacg
caacgatttttaatagatcaagcaatggatcgtgaacgaattcccagggagctagagaaa
ctgcaagggatggtggattattgccatactgaaaattgtctgcagcagtttattgttact
tattttggagagtcaggtgctaccagatgtggtcaatgtgggaactgcacagattctagg
gaagttcaagacgtaacaaaggaagttcaaatggttctttcgtgcgtggttcggatggga
caaagatttggcaagacaattaccgcacaagtattgaccggatctcaaaacaaaaaagta
gtcgattttggttttacgaagttatcgacgtatggcatattaaagggtaagtcattaaaa
gaagtgtctggtttaatggagtttatgattgcagaaggtttactttcggtgaatcatgga
agcttaccaacaatttacgtatcggatgcagggaaagaagtactgatggggaatagagta
gtggagcgcaaaggcgtagctgtaacaaaacaaattgcgaataataatccattgtttgaa
aaactaagaatacttcggaaaaaaattgcggacgaagcaggtgtaccaccatttgttatt
ttttcagataagactctacagcatatgtgtgcagagcgtccgcaaaccgaagaacaatta
ttagaaattcacggaatcggcgaaaacaaacgagaaaaatatggacaagcttttctcgag
gagattcacaattatattaccgtgtag
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