Psychrobacillus sp. INOP01: KD050_11770
Help
Entry
KD050_11770 CDS
T09653
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KD050_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyb03019
]
KD050_11770
03009 Ribosome biogenesis [BR:
psyb03009
]
KD050_11770
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KD050_11770
Messenger RNA biogenesis [BR:
psyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KD050_11770
Ribosome biogenesis [BR:
psyb03009
]
Prokaryotic type
rRNA helicases
KD050_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
WSD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUG43821
LinkDB
All DBs
Position
2320713..2322152
Genome browser
AA seq
479 aa
AA seq
DB search
MVHFKEFKLDEKILRAIEQLGYTEPTEVQQKVIPVVLEKQDVLVKSKTGSGKTASFATPL
CELVDWEENKPQALVLTPTRELAVQVQEDITNIGRYKRIKGLALYGKSPFARQKLALKQK
THIIVGTPGRVLDHIEKGTLDVSKMEYLVIDEADEMLNMGFLEQVESIIKLLPKARTTML
FSATLSDQIKKLSTKYMKQAVSIEIDASEENAPDIEHVKYVVVEELKLSLLEKLTIVENP
DSCIIFCRTKERVEQLVDVLDEKGYTADKIHGGMMQEDRFEVMDDFRKGEFRYLIATDVA
ARGIDIDDITHVIHYDVPLEQESYVHRTGRTGRAGRSGKSIMLATPFEDKFVREIESFIG
FEIPTASEPTKEEIVKGRAAFDVKMQEQPEVKKSKGEQLNADITKLYFNGGKKKKIRAVD
FVGTIAKIEGVTADDIGIITIQDTVSYVEILNGKGPLVLKKMRNTTVKGKLLKVHIANK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atagtgcattttaaagagtttaagttagatgagaagattttacgcgccattgaacagtta
ggatatacagagccaacagaagtacagcaaaaagtaataccagttgttttagagaaacag
gatgtcttggtgaaatctaaaacaggtagtggaaaaacagcttcttttgcgacgccatta
tgcgagcttgtagattgggaggaaaacaaaccgcaagcattagtactaacacctacacga
gaattggcagttcaagtccaagaggatatcacaaatatcggtcgttataaacgtataaaa
ggacttgctttatacgggaaatcaccatttgctagacaaaaattagctctaaagcaaaaa
acacatatcattgtaggtacgcccggtagagtattagaccatatagaaaaaggaacgcta
gatgtgtctaaaatggagtatcttgttattgatgaagcagacgaaatgctgaatatgggc
tttttagaacaagttgaatccattattaaattacttccaaaagcgcgcacgaccatgcta
ttttcagcgacactttcggaccaaataaaaaaattaagtactaagtatatgaaacaagca
gtatccattgaaattgatgcatctgaagaaaatgcgcccgatatagaacatgtgaagtat
gttgtagtagaagaactaaagctttcgttacttgagaagttaacaattgtcgagaatcca
gacagttgtattatcttctgtcgtacaaaggaacgagtagaacagctcgtagatgtactg
gatgaaaagggttatacagctgacaaaattcacggtggtatgatgcaggaagatcgcttc
gaggtgatggacgatttccgcaaaggggaattccgttatttaattgctacggatgttgca
gctcgtgggattgatattgacgatattacacatgttattcattatgatgtgccactggag
caagaaagctatgtacatcgcacaggcagaacagggcgagcggggcgaagtggtaagtcg
attatgctcgcgacaccatttgaggacaagtttgtcagagagatcgaatcgtttattggt
ttcgaaattcctacagcatcagagccaacaaaagaggaaattgtaaaaggtcgtgctgca
tttgatgtgaaaatgcaggagcagccggaggtaaaaaaatctaaaggtgagcaactaaac
gcagatattacaaaactgtatttcaatggtggaaagaaaaagaaaatccgtgcagtcgat
tttgttggaactatagctaaaatcgaaggagttactgcagacgatattggaattatcaca
attcaagacaccgtatcttatgtagaaatattaaacggcaaaggtccgcttgtattgaaa
aagatgagaaatacaactgtcaaaggcaaattactaaaagttcatatcgccaataaataa
DBGET
integrated database retrieval system
