Psychrobacillus sp. INOP01: KD050_14180
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Entry
KD050_14180 CDS
T09653
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KD050_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_14180
Enzymes [BR:
psyb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KD050_14180
DNA repair and recombination proteins [BR:
psyb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KD050_14180
Prokaryotic type
KD050_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QUG40435
LinkDB
All DBs
Position
2829558..2830217
Genome browser
AA seq
219 aa
AA seq
DB search
MDMPSWKDVLREELEKPYFKELQLFLDKEYATQTIFPARNEIGSAFQMTAYDNVKVVILG
QDPYHGEGQAHGMSFSVKPGVRIPPSLRNMLKELKDDLGCPLPANGYLEKWAKQGVLLLN
TVLTVQAGSANSHKGMGWETFTDTVIQKLSNRQNPIIFVLWGKPAQSKIKLIDTEKHMIL
QAPHPSPLSAHRGFFGSKPYSKINAGLAAWGEQPIDFCL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcctagttggaaagatgtgttaagagaggaactggagaagccttattttaaa
gagctacaattatttttagataaggaatatgctactcaaacaatttttcctgcacgtaac
gaaattggcagtgcgtttcagatgacggcttacgataatgtcaaagtagtgattttgggt
caagatccgtatcatggagaaggccaagctcatggaatgagtttttcggtgaagcctggt
gttcgcatacctccgagtttaagaaatatgctgaaggaactgaaggatgatttaggctgt
cctttaccagctaatggatacttagaaaaatgggcgaagcaaggtgtcttgctactaaat
acagtgttaactgttcaagctggttcagcaaattctcataaaggaatgggttgggaaacg
tttacggatactgtgatacaaaagctttccaatcgacaaaacccaattattttcgtttta
tggggtaagccagcacagtccaaaataaaactaatcgatactgaaaaacatatgatactt
caagcgccacacccaagcccgttaagtgcgcatcgaggattttttgggagtaagccctat
tctaagatcaatgcagggttggcggcatggggtgagcaaccaatcgatttttgcctataa
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