Psychrobacillus sp. INOP01: KD050_16275
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Entry
KD050_16275 CDS
T09653
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_16275 (addB)
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KD050_16275 (addB)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KD050_16275 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QUG40833
LinkDB
All DBs
Position
3323117..3326611
Genome browser
AA seq
1164 aa
AA seq
DB search
MSLRIISGRSGSGKTTFIHQEIITELQKAPIGDPIFYIVPDQMSFSSEYDLAAESGLPGL
IRAQVTTFKRLAWRVLQETGGIAKEEISGFGYRMLIRSLLENHKDEFTLFKRAATKRGFT
DQIEVLLKEFSRYCMDYSTMANALSNLENVNAPKTLLDKSSDIMLMLEKIEQKLGVSYID
GEGYLTLLATKIKDSTLLAKTNLYIDGFTSFTPRELEIIEELMKQVKRITIALPMESLQD
AIDEQSLFYQPANTCARLIEIAQIEKLEIEETVHQHEQKRFMSQEIAHIEANLDQLPPLQ
TKSEGNIRITEAANRRAEMHAVARQIRELMQQKSIRYNEMAILHRDADTYEGLIETIFPQ
YDIPVFISKKKPMLHHPLIELSRTILEIIRTDWKYEPVFRAVKTDLFFPLDAPKKTWRER
ADRLENFVLAFGIYGDRWLDERRWVYKKYRGLEFYSKVQTDEELSIQADIHTVRDLIVEP
IKILSEQLKQSKTGKDYAIAIYTFIEALNVYEKLQSLKQAEEENGQLLLASEHEQVWNEW
VNVIDQFVLMFGEKEMSLEEVAKILDEGYDQLAFSSIPPTIDQVIVGNVDIIRLTNIKAA
FVLGVNDGAYPKRMDHEGLLTDTEREWFTQIGFELAPTSKMRLMDENYLIYKALVTASHF
LYVSYPMADNEGKALLPSMYIKKLHQMVSDLPVEVAVVDPSDMLTEEFDLTSISHPRPTL
PYVIMQLRGALETGELSQVWQSVYQYYLEDPYWSKLLKRITKPLTHGNKTERLNEEMTAA
LYGETILSSVSRVEKYYSCPFAHYASYGLKLEEREEYKLEAPQMGDLFHAALKWIADETK
RLDLLWSQLTRPQCYQLARQAVDYIVPVFVHQLLLSTNRYRYIQRKLEQIVANTLIALSR
HSKGSGFVPIAIEAGFGPGEALPALDIPLKRNRKMQLRGRIDRVDAANINGNMFVRIVDY
KSSKKGIDLNEVYHGISLQMLTYLDVAVENADIWLHEEADPAGVLYVHMHNPFIQSQKEM
GDEELQDAIYKSYKMNGLLLDDPEVIMEMDDQISGFSKVIPVRMNKDGNLSKSSSKVVEP
EQMRLLQSFVRKKHEQAGNGMSAGDTRVLPYRIKDKMPCNYCSYRSVCQFDPQDPAQQVR
TLKVEQPEIVAKKIREEMSSNEHS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgttacgtataattagtggtcgatcaggctctggaaaaacaacctttatccaccaa
gaaataatcacagaactacaaaaagctcctataggagacccaatattctacatagtaccc
gaccaaatgtcattttccagtgaatatgaccttgcagcagaatcgggacttcctggacta
attcgggcacaagtaacgacatttaaacgattagcatggcgtgtccttcaggaaacaggt
ggaatcgctaaagaagaaataagtggcttcggttaccgtatgctcattcgtagcctactt
gaaaaccataaagacgaatttactctgttcaaacgagcagctaccaaaagaggatttaca
gatcaaatcgaagtattactcaaagagtttagtagatactgtatggattactctacaatg
gcaaatgccctaagcaatttagaaaatgtgaatgcacccaaaacacttttagataaatcc
tccgacataatgctaatgctagaaaagatagagcaaaaactaggggtcagctatattgac
ggggaaggttacttaacattattagcaacgaaaataaaagactcaacactacttgcaaaa
acaaatttatacatcgatggattcacttcatttacgccgagagaattagaaattatcgag
gaattaatgaaacaagtgaagcgcattacaattgctctaccaatggaatcattgcaggat
gctatagatgaacaatctctgttttatcagccagcaaatacatgtgcaagattgatagaa
atagctcaaatagaaaaactggaaatagaagagactgttcatcagcatgaacagaaacga
tttatgtctcaagaaattgctcatattgaggctaatttggatcagcttcctcccctgcaa
acaaagtcagaggggaatattcgcataacggaagctgccaatcgtcgtgcggaaatgcat
gctgtagcaagacaaatacgtgaattgatgcaacagaaaagtattcgttataacgaaatg
gctattttgcatagagatgcagatacatacgaagggttaatcgagactattttcccgcaa
tatgatattcccgttttcattagtaaaaagaaaccgatgttacaccatccattaatcgaa
cttagtcggactattttagagataattcgaacagactggaaatacgaaccggtttttcgt
gcggtgaagactgatctattttttccattagatgcaccgaaaaaaacatggagagagcgt
gcggatcgattagagaattttgtactggcattcggaatttatggagatagatggttggat
gaaagacgctgggtttataaaaaatatcgaggcttagaattttactccaaagtgcaaaca
gatgaagaattgagtattcaagcagacattcatacagtaagagatttgatcgtcgaaccc
attaaaatcctttcggaacagttgaaacaaagtaaaacgggaaaggattatgcaatagct
atctatacctttatagaagcgctaaacgtctatgaaaaactacaaagcttgaagcaagct
gaagaggaaaacggtcaattacttctagcttctgagcatgaacaagtatggaacgagtgg
gtaaatgtaatcgaccagtttgtattgatgtttggcgaaaaggaaatgtccttagaagaa
gtggcaaaaattttagacgaaggatacgatcaacttgctttttcaagcattccgccaacg
attgaccaagtgattgttgggaacgttgatatcattcgtttaacgaatataaaagcagca
tttgtgcttggcgtaaatgatggagcttatccaaaacggatggatcatgaggggctgcta
actgatacagagcgggaatggttcacacaaattggatttgaactagccccaacgtccaaa
atgcgcttgatggatgaaaattatttaatatataaagctctcgtaacggcatctcatttc
ttatatgtatcctatccaatggcagataatgagggaaaagcactgttaccatctatgtat
attaaaaagctacatcaaatggtgagtgatttacctgttgaagtagctgtagtggatcca
agcgatatgttaacagaagaatttgatttgacttccatcagccacccgcgtcctacattg
ccatatgttatcatgcagctaagaggagcactggaaactggagaattatcgcaagtttgg
caatcggtttaccaatattatttagaggatccatattggtcaaaattattgaagagaatt
acgaaaccactaactcatggcaacaaaaccgaaagattaaatgaagagatgactgcagcc
ttatacggagaaacgatactatcgagtgtgtctcgtgtagagaaatattatagctgtcca
tttgcacattacgcgtcttatggtctaaagctagaagaacgtgaggagtataaattggaa
gctccgcaaatgggagacttgttccatgcggcgttaaaatggattgctgatgagacgaag
cgtttagatttactttggtctcagttaactcgtccgcaatgctaccagcttgctagacaa
gcggtcgattatattgtgccagtttttgttcaccaattattattaagtacaaatcgctat
cgttatatccaacggaaattggagcaaatcgttgctaatactttaatagcattaagcagg
cattctaaaggttcggggtttgttccaattgctatagaagctggattcggtcctggagaa
gcattgccagcactagatattcccctgaagcgtaatcggaaaatgcaattacgcggcaga
atagatagagtggatgcagctaatattaacggcaatatgtttgtccgtattgtcgattat
aaatcttcaaaaaaagggattgatttgaatgaggtttaccatggtatttctcttcaaatg
ttaacttatttagacgtcgctgttgaaaatgctgatatatggctgcacgaggaagctgat
ccagcaggagttttatatgtgcatatgcataatccttttattcaatctcaaaaagagatg
ggggatgaagaattgcaggatgccatttataaatcatataaaatgaatggtctactgctt
gatgatccagaggttattatggagatggacgatcagatttcaggattttctaaagtaatt
ccggtacgtatgaataaagatggaaacttgtctaaatcatcctccaaggtagtagagccg
gaacaaatgagattattgcaatcatttgtacgtaaaaagcatgagcaagcaggtaacggg
atgagtgctggagatacgcgagttctaccttatcgaataaaagataaaatgccatgtaat
tattgctcatatcgtagtgtttgccaattcgatccgcaagatcctgcacaacaagtgcgt
acattaaaagtggagcagccagaaatagtagcaaaaaaaattcgagaggagatgagttca
aatgaacattcctaa
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