Psychrobacillus sp. INOP01: KD050_17565
Help
Entry
KD050_17565 CDS
T09653
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyb03032
]
KD050_17565 (topA)
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_17565 (topA)
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KD050_17565 (topA)
DNA replication proteins [BR:
psyb03032
]
Prokaryotic type
DNA Topoisomerases
KD050_17565 (topA)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KD050_17565 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
DUF2996
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QUG41075
LinkDB
All DBs
Position
3598235..3600310
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIEKYLGKKYKVKASIGHVRDLPRSQMGVDTENNYEPKYITIRGK
GPVLQELKTAAKKAKKIYLAADPDREGEAIAWHLANSLNVDIESDCRVVFNEITKEAILE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDRED
EINNFTPEEYWTIEGQFDKNKKAFDALYYGSEKEKRKLSNEEEVKEVLKLMKGKKFEVAN
VVKKERKRNPAPSFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIDLGKKQGTVGLITYM
RTDSTRISDSAKADVQEYIKTEFGAEFISTKKVEKQSKKAQDAHEAVRPTSVLRTPNELK
AILSRDQLKLYKLIWERFIASQMASAILDTVAVDLKNGEVYFRANGSQVKFPGFMKVYVE
GSDDQTDDKDKLLPVLEVGDKVNALSIDPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALETKRFVPTELGTIVHQLVLEFFPQILDIEFTAQMERDLDSVEEGQ
VKWVEVIDGFYQDFEKRVIYADAEMEKIVIKDEPTGEDCENCGSPMVYKLGRYGKFMACS
NFPECRNTKAIIKEIGVPCRVCGEGQIVERKSKTKRLFYGCNQYPTCEFVSWDKPINRPC
PKCNEMLVEKKLKKGIQIQCVACDYKEDPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatttggtaattgttgaatcgccagcaaaggcaaaaacaatagaaaaatat
cttggaaaaaaatataaagttaaagcatctattggtcatgtacgtgaccttcctagaagt
caaatgggtgtcgatacggaaaataattacgaaccaaagtatataacaatcaggggtaaa
ggcccggtactacaagaactaaaaactgcagcaaaaaaagcaaagaaaatttatctcgcg
gctgaccccgacagagaaggggaagcaatagcttggcacttggcaaactctttaaatgta
gatattgaatcggattgccgagtagtgtttaatgaaattacaaaagaggctatcctagaa
tcctttaagcatcctagacctattaatatggatctagtcgatgcacaacaagcgagaaga
attttagaccgacttgtaggatacaatattagtccaattttatggaaaaaagtaaagaaa
ggtctgtcagcaggccgagtgcaatctgtagctcttcgtttaattattgatcgggaagat
gaaatcaataatttcacaccagaagagtactggacaattgaaggacaattcgataaaaat
aagaaagctttcgatgcgctttattatggaagtgagaaagaaaaaagaaaactttctaat
gaagaagaagtaaaagaagtactaaagcttatgaagggcaaaaagtttgaagttgctaat
gttgtgaaaaaagaacgaaaacgcaatccagccccttcctttactacatcatcccttcaa
caggaagcagcaagaaaactaaattttagagctagaaaaaccatgatgcttgcacagcaa
ttgtatgagggaatcgacttaggtaaaaaacaaggaacggtcgggttgattacctatatg
cgtacggattctacaagaatatcggatagtgcgaaagcagatgtacaggaatatataaaa
actgaatttggtgcagaattcatttctacgaaaaaggtagaaaagcaatcgaaaaaagca
caagatgcccacgaagctgttcgacctacgagtgttctaagaactccgaatgaactaaaa
gcaattctatctcgtgaccaactaaaattatacaagttaatatgggagcgttttatagct
agccaaatggcatctgctatattagatacagtagctgttgaccttaaaaacggggaagtt
tactttagagcaaatggttcacaagtaaaatttcctggatttatgaaggtgtacgtggaa
ggttcggatgatcaaactgatgacaaggacaaactattaccagttttggaagtcggggat
aaagtaaatgcgttgtctattgacccgaagcaacattttactcagcctcctccaagatac
tcggaggcaagacttgtgaaaacgttggaagagttagggattggtagaccttctacttat
gctccaactttagatacgattcaaaaacgtgggtatgtagctttagagacgaagcgtttt
gttcctaccgagcttggaacaatcgtccatcagcttgtattagagtttttccctcaaatt
ttagatatagagttcactgcccagatggaaagagatttggatagtgtagaagagggacaa
gtaaaatgggtggaagtaatcgatggcttctatcaggatttcgagaagcgtgtcatatat
gcagacgctgagatggagaaaatcgttattaaagatgaaccaacgggagaagattgtgaa
aactgtggttctccaatggtttataaattaggacgatatgggaaatttatggcatgtagt
aatttcccggaatgtcgaaatacaaaggcgatcatcaaggaaataggtgtcccttgccga
gtgtgtggagaaggacagattgtggagcgcaaaagtaaaacgaagcgtttattttatggg
tgtaaccaatatccaacctgtgaattcgtttcttgggacaaaccaataaatagaccatgt
ccaaaatgtaatgagatgttagtagagaagaaattgaaaaaaggtatacaaatacaatgt
gttgcgtgtgattataaagaagatccgcaaagttag
DBGET
integrated database retrieval system
