Psychrobacillus sp. INOP01: KD050_17755
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Entry
KD050_17755 CDS
T09653
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb02020
Two-component system
psyb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KD050_17755
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KD050_17755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyb03021
]
KD050_17755
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psyb02035
]
KD050_17755
Transcription machinery [BR:
psyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KD050_17755
Bacterial motility proteins [BR:
psyb02035
]
Flagellar system
Flagellar assembly proteins
Stator
KD050_17755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
ATP-cone
DUF4140
WAC_Acf1_DNA_bd
DUF3793
GrpE
Motif
Other DBs
NCBI-ProteinID:
QUG41109
LinkDB
All DBs
Position
3632659..3633432
Genome browser
AA seq
257 aa
AA seq
DB search
MANQDSTDEQLLWKSWTESKDPQAGDLLMRKYIPLVNYHVQRIGAGIPKNISREELKSLG
MMGLFDAINKFDYSRELKFDTYASFRVRGAIIDGLRKEDWLPRSSREKAKKLEAKIEELE
QKLMRHASAEEIAEFVEMPVEDVYHTVQEHFFSNVLSIDEQLQESEEPENKSYVIRDDSQ
KTPEQQMVKRELIDDLADQIQQLNENEQLVLSLFYTEELTLTVIGEMLGLSTSRISQIHS
KALFKLRKLLMNEMMNV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatcaagattcgacagatgagcagcttctatggaagagttggactgaaagcaaa
gatcctcaggccggagatttactcatgagaaaatatataccgctagttaactatcatgtg
caaagaatcggtgcaggtatccctaaaaatatatctagagaagagcttaaaagtttagga
atgatgggattatttgatgctatcaataaatttgattatagtagagagctaaaatttgat
acgtatgcttcgtttcgagttagaggggctatcattgatggattgaggaaagaagattgg
cttccacgctcttcgcgagaaaaagcaaagaaattagaagctaaaattgaagaactcgag
caaaagttaatgagacatgcatctgctgaagaaatagcggaatttgtcgaaatgcctgta
gaagatgtatatcatacagtacaggagcattttttctccaatgtactgtcaatcgatgag
caactacaagaaagtgaagaacctgaaaacaaatcatatgtcattcgagatgactctcag
aaaactcctgaacaacaaatggttaagcgagagttaatcgatgatttagccgatcaaatt
caacaattaaatgaaaatgagcaattagtgttaagtttgttttatacagaggaattgacg
ctcacggttattggagagatgctaggtttatctacttctagaatatctcaaattcattcg
aaagcactttttaaacttagaaaactattaatgaatgaaatgatgaatgtctga
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