KEGG   Psychrobacter sp. DAB_AL43B: DABAL43B_0004
Entry
DABAL43B_0004     CDS       T04748                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
psyc  Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:psyc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psyc03032]
    DABAL43B_0004 (gyrB)
   03400 DNA repair and recombination proteins [BR:psyc03400]
    DABAL43B_0004 (gyrB)
Enzymes [BR:psyc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DABAL43B_0004 (gyrB)
DNA replication proteins [BR:psyc03032]
 Prokaryotic type
  DNA Topoisomerases
   DABAL43B_0004 (gyrB)
DNA repair and recombination proteins [BR:psyc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DABAL43B_0004 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C GyrB_insert Toprim HATPase_c GyrB_hook HATPase_c_3 DUF826 Toprim_4
Other DBs
NCBI-ProteinID: SLJ83228
UniProt: A0A1U6GIC0
LinkDB
Position
I:5143..7770
AA seq 875 aa
MSDSLPTDHQQLTSDSVVETIAAAVVPEALPSDYSSKDIRVLRGLEAVRVRPGMYIGDTD
DGTGLHHMVFEVVDNSIDEALAGHCDQIDIIIHEDESVSVMDNGRGVPVDIHPEEGVSAA
QVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSKKLEMNIWREGYHYNQTYTDGVPD
SDIQQMEATDQTGTQIRFYPSHDVFTGTTFEYDILAKRLRELSFLNSGVRIVLTDERIDK
RHEFEHKGGLSEFVSYINAGKDGVNDVFHFISNQDDGISVEVALQWTDTYNEKVLCFTNN
IPQRDGGTHLSGFRSALTRCLNTYMDRENLFKKEKVVATGDDAREGLTAIVSVKVPDPKF
SSQTKDKLVSSEVKSAVESAMHDKFNDYLQENPSAGKLIAGKIIDAARARDAARKAREMT
RRKTTLDIAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRSRKTQAILPLKGKILN
VERARFDKMLSSAEVGNLITALGCGIGPDEYNPDKVRYHKIIIMTDADVDGSHIRTLLLT
FFFRQTPELIERGYIYIAQPPLYKVKKGRQELYLKDDEALKAYLLSSTIDSTKLHINADA
PAITGQALETLLNDYNQTQLIKARLQIRYPAVLLDALTHTPKLSTDMTYDKSAMEAWKES
LQIQLNHFGSDLYPEIELVNIHAPVSATMDAVTADLLGMKPQPEPQLAIEGESVSSGDAL
STKAQWLPRITVYVHQLAHHYLLDASFINSSEYSKLLRLSAEWNTLLDDSAFIRRESTSG
TNKDIPIRDFDYLWQQMMLEARRGLAVQRYKGLGEMNADQLWDTTMDPENRRMLRVTIED
AIAADHMFTCLMGDHVEPRRIFIEENALTVSNLDI
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgagtgattcattacctaccgaccaccagcaactaacgtcagacagcgtagttgagact
attgccgccgctgtcgttcctgaagcattaccctctgattatagctcgaaagatattcgt
gtactgcgcggattagaagcagtgcgcgtgcgtcctggcatgtatatcggtgataccgat
gatggtaccggcttgcatcatatggtttttgaggtagtggataactctatcgatgaagcg
cttgccggtcattgtgaccagattgatatcatcattcacgaagatgaatctgtgagcgtc
atggataatggtcgcggcgttcctgtggatattcatccagaagagggtgtgtctgcagca
caggtcattatgacggtactgcatgctggtggtaagtttgatgacaacagttataaagta
tctggcggtttacatggcgtcggtgtttcggttgttaacgccttatctaaaaagcttgag
atgaatatctggcgcgaaggctatcattataatcagacttataccgatggtgtgccggat
agcgatatccagcagatggaagcgacagatcaaacgggtacgcaaatccgtttttatcct
agtcatgatgtgtttacgggcactacctttgagtatgatattttagccaagcgtttacgt
gagctgtcatttttaaactcaggtgtacgtattgtgctaactgatgagcgtattgataag
cgtcatgagtttgagcataaaggtggattgtctgaatttgttagctacatcaatgctggt
aaagatggcgtcaacgatgtatttcatttcatcagtaatcaagatgacggtatcagtgtc
gaggttgccctacagtggacggatacttataacgaaaaagtgctgtgctttaccaataat
attccgcaaagggatggcggcacgcatttatcaggctttcgctcagcgttaacgcgttgt
ttgaatacctatatggaccgtgaaaacctcttcaaaaaagagaaagtggttgcgactggt
gatgatgctcgtgaaggtttaacagctattgtatccgttaaagttcctgatcctaagttt
tcgagtcaaactaaagataagctggtatcaagcgaagtaaaatcagcggtcgaatcagca
atgcatgataagtttaatgattatctgcaagagaatcccagcgctggtaaattgattgcc
ggtaaaattattgatgccgcgcgtgctcgtgatgcggctcgtaaagcgcgtgagatgact
cgccgtaagactactctagatatcgcaggtttaccgggtaagttggcggattgccaagaa
aaagatccggcattatcagagctatacatcgtggaaggggattctgctggcggttcagcc
aagcaaggtcgtagccgtaaaactcaggcgattttaccattaaaaggtaaaatcttgaac
gttgagcgcgcgcgttttgataaaatgctatcgtctgctgaagtcggtaacctaattact
gcgcttggttgtggtattggtcctgatgaatataatcctgataaagtgcgttatcataaa
attattatcatgaccgatgcggacgttgatggatcacatattcgtacgttgctattgact
ttcttcttccgtcaaacacctgaattgattgaacgtggttatatttatatcgcgcagcca
cccctttataaagtgaaaaaaggtcgtcaagagctgtacctaaaagacgatgaagcgcta
aaagcgtatttattatcatcaacgattgatagtactaagttgcatatcaatgctgatgca
cctgcgattactgggcaagcgcttgagacgttgctgaatgattataaccaaacacagctg
attaaagcgcgtctgcaaattcgttatccagcggtattactcgacgcattgacgcatacg
ccgaagcttagcactgatatgacttatgataagtcagcgatggaagcatggaaagagtcg
ttacagatccagcttaatcacttcggtagtgatttatatcctgagattgaattggttaat
atccatgcgcccgtatctgcaactatggatgcagtcactgctgacttgttaggtatgaaa
ccgcagccagaaccacaattagccattgaaggtgagtctgtttctagtggtgatgcgctc
tcaacgaaggcgcaatggttaccacggataacggtttatgtgcatcagctagcacatcat
tatctgcttgatgccagctttatcaactcaagcgaatacagcaagctactgcgtctatcc
gctgagtggaatactttgctcgatgacagcgcctttatccgacgcgaaagtacgtcagga
actaataaagatattccaatacgtgactttgattacctatggcagcagatgatgctagag
gcacgtcgcggtctggcggttcagcgctataaagggctgggcgagatgaacgctgatcag
ctttgggataccactatggatcctgaaaatcgtcgtatgctacgcgtgacgattgaagat
gctattgcagctgaccatatgtttacctgcttgatgggtgatcatgtcgagccgcgccgt
atctttattgaagaaaatgcgctgacggtttctaatttagatatatag

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