Psychrobacter sp. DAB_AL43B: DABAL43B_0086
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Entry
DABAL43B_0086 CDS
T04748
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyc03016
]
DABAL43B_0086 (truB)
Enzymes [BR:
psyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DABAL43B_0086 (truB)
Transfer RNA biogenesis [BR:
psyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DABAL43B_0086 (truB)
Prokaryotic type
DABAL43B_0086 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Imm75
DKCLD
Motif
Other DBs
NCBI-ProteinID:
SLJ83308
UniProt:
A0A1U6GIJ2
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All DBs
Position
I:100219..101298
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AA seq
359 aa
AA seq
DB search
MSIVSTKASTQADKNANKTLTKTKVSGVILVDKPQGMTSQQVVSKVKYLFKSPNHDSKKA
GHTGTLDPMATGLLPICLGEATKFSHYQLDADKSYQATILLGSQTDTGDADGKIVAQAVI
PTFDEVLLKKVAQQFLGAQQQIPPMYSALKKDGKKLYEYARAGIEIERAPRDIVLKAIDL
KAIDDKQIQLTVTCSKGTYVRVLAEDIAKTLHTLGHLTALRRLQVGDFKIDEAIALADLE
ALTLASRQTHLLPVDACVNIDAELTLSAEQCERVQMGQRLNVFEQLTDDLQSYIKMTIDQ
QPCIDDNKQNIDDSKNDTEAPLLHEIAVDICLINEQGQFIGLGAVSLNGRLQPKKLIQL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgtctctacaaaagcctctacgcaagctgataagaatgccaataaaacgctc
actaaaaccaaagtgtcgggcgttatattagtagataagcctcagggtatgacctcacag
caagtggtatcaaaggtgaaatatttatttaaatcaccaaatcatgacagtaaaaaagct
ggtcatacgggcacgcttgacccaatggcaaccggtttactgcctatttgtttgggtgaa
gcgactaaatttagtcattaccaacttgatgctgataaatcttatcaagcgactatttta
cttggtagccaaactgatactggtgatgccgatggtaaaattgttgcacaggctgtaata
ccaacgtttgatgaggtactattaaaaaaagttgctcagcaatttttaggggctcagcag
caaattccgccgatgtactctgctttaaaaaaagacggtaaaaagctatatgaatatgca
cgtgcgggtatagagattgagcgcgcgccaagagatattgtactcaaagcaatcgaccta
aaagctatcgatgataagcagattcagttgacggtgacttgttccaagggcacctatgta
cgtgtattagcagaagatatcgctaaaacgctgcacacgctaggacatttgactgcattg
cgccgtctacaagttggtgatttcaaaatagacgaagcaattgctttggcggatttagaa
gcgctaacattagcgagtcgtcagacacatttattgccagtggatgcttgtgtcaatatt
gatgctgagcttacgttgtcagcagaacagtgtgaacgtgtacaaatgggtcaacgctta
aatgtatttgagcagctgactgatgatttgcaaagctatattaaaatgactatcgatcaa
cagccatgtattgatgacaataaacaaaatattgatgatagtaaaaatgatacagaagca
ccattattgcatgagatagcggtagatatctgtctcataaatgagcagggacaatttatt
ggtctcggcgctgtgagtctcaatggtcgattgcaacctaaaaaattgattcagttataa
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