Psychrobacter sp. DAB_AL43B: DABAL43B_0268
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Entry
DABAL43B_0268 CDS
T04748
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc00300
Lysine biosynthesis
psyc00470
D-Amino acid metabolism
psyc01100
Metabolic pathways
psyc01110
Biosynthesis of secondary metabolites
psyc01120
Microbial metabolism in diverse environments
psyc01230
Biosynthesis of amino acids
Module
psyc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DABAL43B_0268 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DABAL43B_0268 (dapF)
Enzymes [BR:
psyc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DABAL43B_0268 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
RHS
Motif
Other DBs
NCBI-ProteinID:
SLJ83486
UniProt:
A0A1U6GIZ5
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All DBs
Position
I:304649..305536
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AA seq
295 aa
AA seq
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MLIEFTKMHGLGNDFMVIDLVTQRLELTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDF
SYRIFNTDGMEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDRYGWVEVDM
GKPKFEPSEIPFTPRATTKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDNVLDAKVETL
GKAIESHPAFPERVNVGFMQVMNQRHIRLRVYERGVGETQACGTGACAAVAIGIREGWLD
EGEDIRAQLYGGSMVIKWQPGYSVMMTGPTAFVYEGVFSPDGLMAQAGIKPNPES
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgctaatagaatttactaagatgcatgggctgggcaatgactttatggtcatcgattta
gtgactcagcgcttagagttgaccaaggatttggtacagttattgggtgatcgtcatcta
ggtattggttttgatcagttgctggtggtcgagccaccgatgcgccccgatgttgatttt
agctaccgcatttttaataccgatggtatggaagtcgagcagtgcggcaatggcgcgcgc
tgtttcgcccgtttcgtacaagcgcgcaaactgtcatttaagcagcgcctgcgcgttgag
accgcaagtggtattatctcgttgaccaccgaccgctatggttgggtagaagtcgatatg
ggcaaaccgaagtttgagccaagcgaaatcccttttacaccaagagccacgaccaaaatt
cagaatgcttatcatttggacgttaatggcacgcctgtgcagctgtatgtcgccaatatg
ggtaatccgcatgcggtgattaaagtcgataatgtactcgatgcaaaagttgaaaccttg
ggcaaagccatcgaatcgcatcctgcctttccagagcgcgtcaatgtcggttttatgcaa
gtaatgaaccagcgtcatattcgtttgcgggtttatgagcgcggtgtcggtgagacgcaa
gcttgtggtaccggcgcttgtgcagccgttgcaatcggcatacgcgaaggctggcttgac
gaaggcgaagatatacgcgcacagctttatggcggcagcatggttatcaaatggcagccg
ggctattcagtcatgatgacgggaccaactgcttttgtttacgaaggggtatttagccca
gatggtctgatggcgcaagcgggtattaagcctaacccagaaagttaa
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