Psychrobacter sp. DAB_AL43B: DABAL43B_0602
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Entry
DABAL43B_0602 CDS
T04748
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DABAL43B_0602 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyc03021
]
DABAL43B_0602 (rpoA)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_0602 (rpoA)
Enzymes [BR:
psyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DABAL43B_0602 (rpoA)
Transcription machinery [BR:
psyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DABAL43B_0602 (rpoA)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DABAL43B_0602 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
Motif
Other DBs
NCBI-ProteinID:
SLJ83810
UniProt:
A0A1U6GK28
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All DBs
Position
I:701190..702197
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AA seq
335 aa
AA seq
DB search
MMLNATEFLTPNAINVDTVNETIAKVTLEPLERGFGHTLGNALRRILLSSLPGAAVIEAE
IDGVDHEYSTLEGLQEDVLDLLLNLKGLAITLHDQNEVFLTLDKQGPGTITAADITLPHN
VDIINPELVLGTLNDRGHLKMRLRVVMGRGYEPANQRREDGDTKAIGRLKLDASFSPVLR
VAYQVENARVEQRTDLDRLIIELETNGTIDPEEAIRKAATILQQQISIFVDLEAEEAPEP
VKEKEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTE
IKDVLASKDLELGMRLDNWPPADLRVDDRFSYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaatgcaactgagtttctaacgccgaacgccatcaacgtggatacggttaac
gaaacgattgcgaaagtcacgctcgaaccgttagaacgcggctttggccataccctaggg
aatgccttacgtcgcatcttgttatcttcattacctggtgctgcagtcattgaagctgag
attgatggtgttgaccatgaatactcaacgcttgaagggctacaagaagacgtgcttgat
ttgcttttgaacttaaaaggcttagcaatcacccttcatgaccaaaatgaagtatttttg
accttggataaacaaggtccaggcactattactgctgcagacatcacgttaccgcacaat
gtagacatcatcaatccagaattggtattgggtacattgaatgaccgtggtcatcttaag
atgcgtttgcgtgtagtaatgggtcgtggatatgagccagcaaaccaacgccgtgaagat
ggtgatactaaagcaattggacgcctaaagcttgatgcaagttttagtcctgtgcttcgt
gttgcttatcaggttgagaacgcacgtgtagaacaacgtaccgatcttgatcgtcttatc
attgagcttgaaactaatggcactatagatccagaagaagcaattcgtaaagcagccact
attttacaacaacagatttctatctttgttgacctagaagctgaagaagcgcctgagcct
gtgaaagaaaaagaagaggttgatccggtgctattacgccctgtggacgatcttgaacta
acggttcgctcagccaactgcttgaaagctgaaaacatttactatatcggtgatttggta
cagcgttcagagactgaacttctaaaaaccccaaatcttggtaagaaatcattaacagaa
atcaaagacgtattagcgtctaaagatttggagcttggtatgcgcctagataactggcca
ccagctgatttacgtgttgatgatcgcttttcttatcgtagccgttaa
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