Psychrobacter sp. DAB_AL43B: DABAL43B_0645
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Entry
DABAL43B_0645 CDS
T04748
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc00300
Lysine biosynthesis
psyc01100
Metabolic pathways
psyc01120
Microbial metabolism in diverse environments
psyc01230
Biosynthesis of amino acids
Module
psyc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DABAL43B_0645 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psyc01002
]
DABAL43B_0645 (dapE)
Enzymes [BR:
psyc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DABAL43B_0645 (dapE)
Peptidases and inhibitors [BR:
psyc01002
]
Metallo peptidases
Family M20
DABAL43B_0645 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
SLJ83853
UniProt:
A0A1U6GK01
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Position
I:complement(747590..748801)
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AA seq
403 aa
AA seq
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MSDVNKNIFSQTHQQATLALSIALLERPSVTPDDDGCQDILSERLTQAGFACEFMYYGDR
QAKGEHAEVKNLWARRGTADPVICFAGHTDVVPTGAEKNWTYPPFTPTIADGYLWARGAA
DMKTGIAAFTVAAERFVQNHPEHNGSIAFLITSDEEGPSINGTVKVIEALEARQEKITYC
LVGEPSSTDTLGDIIKNGRRGSLGAVLTVTGKQGHVAYPHLASNPIHAAMSALAELTAAT
WDNGNDYFPATSLQISNINSGTGATNVIPEALEVVFNFRFSTETTEDELKAKTHAIFDKY
FADSKVKYDIHWKLSGQPFLTPEGKLVSACQQAIKSVTGTDTTLSTSGGTSDGRFIAPTG
AQVVELGVRNATIHQVDEKVEVDDLGKLAQIYEGILENLLLDE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgttaataaaaacatattttctcaaacccaccaacaagcaaccttagcctta
agtatcgccctacttgaacgcccttccgtcaccccagatgacgatggctgccaagatata
ttgtcagaacgactaacgcaagcaggctttgcttgcgaatttatgtattatggtgataga
caagcaaaaggcgaacatgctgaagtcaaaaacttatgggcgcgacgtggcacagcagat
ccagtcatttgctttgcaggtcataccgatgtcgtaccaacaggtgctgaaaaaaattgg
acctatccaccatttaccccaaccatcgctgatggctatttatgggcgcgcggtgccgct
gatatgaaaactggtattgccgcatttactgtcgctgccgaacgcttcgtgcaaaaccat
cctgagcacaatggctctattgcttttttgattacctcagatgaagaaggtccgtcaatt
aatggtacggtcaaagtgatagaagccttagaagcgcgtcaagaaaaaatcacttattgc
ctcgttggtgagccatcgagtaccgatacacttggtgatattattaaaaatggtcgccgt
ggctcattgggcgcggtactcaccgtcactggcaaacaaggtcatgtcgcctatccacat
ttagccagtaatcctattcatgcagctatgtcagcgctagcggaattaacggctgctaca
tgggacaatggcaatgactacttccctgcgacctccttgcaaatctccaatattaatagt
ggtactggcgcaaccaatgtcatccctgaagccttagaagtggtatttaacttccgcttt
tcaactgaaaccactgaagatgagttgaaagcaaaaactcacgctatcttcgacaagtat
ttcgctgatagcaaagtcaaatatgatatccattggaaattatctggtcagccattttta
acacccgaaggtaaattggtctcggcatgtcagcaagcgattaaatctgtgacggggact
gatacgacgttatccacttcaggtggtacttcggatgggcgctttattgccccaactggc
gcgcaagtcgttgagctgggcgtgcgtaatgcaacgattcatcaagtcgatgagaaggta
gaggttgatgatttgggaaagcttgcgcagatatatgaagggattttagagaatttactg
ttagatgaatag
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