Psychrobacter sp. DAB_AL43B: DABAL43B_0856
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Entry
DABAL43B_0856 CDS
T04748
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03410
Base excision repair
psyc03430
Mismatch repair
psyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DABAL43B_0856 (recJ)
03430 Mismatch repair
DABAL43B_0856 (recJ)
03440 Homologous recombination
DABAL43B_0856 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_0856 (recJ)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DABAL43B_0856 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DABAL43B_0856 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DABAL43B_0856 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF7108
Motif
Other DBs
NCBI-ProteinID:
SLJ84055
UniProt:
A0A1U6GKL3
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All DBs
Position
I:992270..994096
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AA seq
608 aa
AA seq
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MLNLTPRYISTRIDELPAALQPLAAQSFTLARLYAGRGIVQPDELETQLSGLLPAERLKG
IIEAVNLLDVAIDEGQRILIVGDFDCDGATSTALMMRALTAMGAKVDFLVPDRFKYGYGL
TPEIVELGIETYQPQMIVTVDNGISSHEGVARAQADGITVIITDHHLTTKETPPAEAVVN
PNQLDCNFTSKALVGVGVAFYVLGRLAKLRREVGKSTVQVSQYLDLVALGTIADVGVLDK
NNRILVHHGLNAIRQGRCSLGILALLEQAGRDPKKLQAQDFGFVLGPRINAAGRMDNMRI
GIECLLADDWQTAQRLAQELEQLNRIRRQVEGEMREQADSIVQALATAATDIDDNANADE
SADMIIQHKTEKQVVNNHDRSIVLYQDDWHQGVIGIVAGRLKESHYLPSIVFAPADTKRT
GDDDAIKGSARSIAGVHIRDAIEQVAERHPDLISHFGGHAMAAGLTLKRGNFDGFVTALS
DVLAQMDDEVFAEQKFTDGPLQAGDFSLWLAEHLADASIWGHGFAPPIFDGVFEVLNFKI
LKDKHLKLSLRYPDVQYPIEAIQFNFDSSAWDYRAEKVHILFELDINEWNGKQSLQLMVK
DLAVITEV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatttaaccccccgttatatcagcactcgcatcgacgagttgcccgccgcgttg
caaccacttgccgcccaatccttcacccttgctcgcctatatgcgggtcgagggatcgtg
caacctgatgaacttgaaactcagttatccggtttgttacctgctgagaggctaaaaggt
attattgaggcggtaaatctcttagatgtcgccatcgatgaagggcaacgtattcttatc
gttggtgactttgattgcgatggggccaccagtactgcgctcatgatgcgcgcgctgaca
gcgatgggtgctaaggtagactttttggtgccggatcgctttaaatacggttatggtctg
acgccagagattgtcgaattaggtattgagacttatcagccgcaaatgattgtcacggta
gacaatggaatctcaagccatgaaggtgttgcacgtgcgcaggctgatggtatcaccgtc
attatcactgaccatcacctgacgactaaagagacgccacctgcggaagccgtggtcaac
cccaatcagctcgattgtaattttaccagtaaagcgctcgtgggcgttggcgtggcgttt
tatgtactggggcgacttgcgaaactacgccgcgaagtgggcaagtctactgtccaagta
agtcagtatctggatttagtggcgcttgggacgattgctgatgttggtgtccttgataaa
aacaatcgtattttagtacatcatgggttgaacgccattcgtcaggggcgctgctctttg
ggtatattagcgttattagagcaagcaggtcgtgatcccaaaaaactacaggcgcaagac
tttggttttgtcttagggccgcgtatcaatgccgctggtcgtatggataatatgcgcatc
ggtatcgagtgtttactagcggatgactggcaaaccgcgcaacgattggcgcaagagctt
gagcagctcaatcgtatacgtcgtcaagtagaaggcgagatgcgtgagcaagcggatagc
atcgtccaagcgttagctactgctgctacagatattgatgacaatgctaatgctgacgaa
agcgctgatatgattattcagcataaaactgagaaacaggttgttaataatcacgatcgc
agtattgtgttatatcaagatgactggcaccaaggcgtgatcggtatcgttgcaggtcgc
ttaaaagaaagccattatttgcctagcattgtttttgcgccagcggatactaagcgcacg
ggtgacgatgatgctattaaaggctcggcgcgttctatcgcaggcgtgcatattcgtgat
gcgattgagcaagttgccgaacgtcatcctgatttaatcagccattttggtggtcatgcg
atggcagcaggattgacattgaaacggggtaattttgatggctttgtgacagctcttagc
gacgtactggcacagatggatgatgaagtatttgctgagcagaaatttaccgatggtcct
ttgcaagcgggcgactttagcttatggctcgctgagcatttagcggatgccagcatttgg
ggacatggattcgcgcccccgatatttgatggtgtatttgaagtcttaaactttaaaata
ctaaaagacaaacatcttaagttatctctgcgttatcccgatgtgcagtacccaattgag
gcaattcaatttaactttgatagcagtgcttgggattaccgcgccgaaaaagtgcatata
ttgtttgagttagatatcaatgagtggaatggcaaacaaagcttgcaattaatggttaag
gatttggcggttattactgaggtctaa
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