Psychrobacter sp. DAB_AL43B: DABAL43B_0900
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Entry
DABAL43B_0900 CDS
T04748
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DABAL43B_0900 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_0900 (uvrB)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DABAL43B_0900 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DABAL43B_0900 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
DUF87
AAA_30
SWI2_SNF2
Microtub_bd
AAA
Collagen_bind_2
DUF8810
Motif
Other DBs
NCBI-ProteinID:
SLJ84098
LinkDB
All DBs
Position
I:1039298..1041409
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AA seq
703 aa
AA seq
DB search
MRMPEPRSSRQLNQLATQLQGEAEISGVNASGTQISSRAFEMITEFEPAGDQPQAIKKLV
NGINAGMDEQLLLGVTGSGKTYTMAKVISETQRPTIIMAHNKTLAAQLYGEFKSFFPNNA
VEYFVSYYDYYQPEAYVAASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSCI
YGLGDPESYLKMLLHVVVGDKIDRTATIKRLVEMQYTRNELDFGRGTYRLRGELLDIYPA
ESEQLAVRVHLFDNEVEKITWFDPLTGKTVRSVPRITIYPKSHYVTPRNKLEAASHTIRA
ELEPRLEYFRDNNKLIEAQRLKERTQYDLEMIQQLGYCNGIENYSQHLSGRPSGEAPPTL
FDYIPEDALLFIDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWERI
KPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREKD
ERVLITTLTKRMSEDLTSYLKEYDVKVAYLHSDIDTLERMQIIHELRTGVHDVLVGINLL
REGLDMPEVSLVAIFDADKEGFLRSERALIQTIGRAARHINGKAILYADRITNSMQKAID
ETDRRREKQVAFNLEHNITPTGARRSITDKIDTGDDHDANDNQMIPIKSNLPDVDISILR
SPDLLAKEINRLEKLMKQMSRDLKFEDAAKTRDKVLELKAHLI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgcctgaaccgcgctcgtcgcgtcagttaaaccaattggccactcagctacaa
ggcgaagctgaaattagtggtgttaatgcgtctggtacgcaaatatcaagtcgcgccttt
gagatgattaccgaatttgagccagcaggcgatcagccgcaagcgataaaaaagctggtt
aatggcatcaatgctggtatggatgagcagttattattgggtgtcacaggttctggtaag
acctataccatggcaaaagttatatctgagacccaacgtcccaccattatcatggcgcat
aataagacgcttgctgcccagttatatggggagtttaaatcatttttccccaataacgcg
gttgagtattttgtcagctattatgactattatcagcctgaagcttatgttgctgccagc
gatacctttatcgaaaaagacagtgccattaacgatcatattgaccagatgcgtctgtca
gctacacgtgcactacttgagcgccgtgatgcgattatcgttgcgtcagtgtcctgtatc
tatggtttgggtgatccagaaagttatctgaaaatgctgctgcatgttgttgtcggtgac
aaaatagaccgtactgcgacgattaagcgtctggttgagatgcaatatacgcgtaatgag
ttggactttgggcgtggtacttatcgtctgcgcggcgagctgctagatatctatcctgcc
gagtctgagcaactggcggtgcgtgtgcatctatttgataatgaagtagaaaaaatcacg
tggtttgatcctttgacaggtaagaccgtacgtagtgtgccgcgtattactatctatcca
aaatcgcattatgtgaccccgcgtaacaaattagaagcggctagccataccattcgtgcg
gagcttgaaccgcggttagagtatttccgcgacaataataaactgattgaagcacagcgt
cttaaagagcgtacccagtatgaccttgagatgattcaacagcttggctactgtaacggt
atcgaaaactactcgcagcatctctctggtcgtccatcaggagaagcgccaccgacactg
tttgattacattccagaagatgcgctgctattcattgatgaatcgcatgtaacggtatcg
caaattggcgcgatgtataaaggcgatagatcgcgtaaagagaacttggtcaattatggc
tttcgtttaccaagcgcgatgaataaccgtccgatgaagtttgaagaatgggagcgtatc
aagcccaaaactatttatgttagcgctacgcctgcattgtatgagcttgagcatagtgag
caagtggtcgagcaagtcgtgcgtccaaccggtctgattgaccctgagattgagattcgt
ccggtattgacgcaagtcgatgatgtgctatcggagattaccaaacgccgtgaaaaagat
gagcgggtgctaatcacgaccttgaccaagcgtatgtcagaggatttgaccagttatcta
aaagaatacgatgtcaaagtcgcttatctacactcggatattgacactcttgagcgcatg
cagattatccatgagctgcgtactggcgtacatgatgtgctggtgggtattaacttgctg
cgtgaaggtcttgatatgcctgaggtgtcattggtcgcgatatttgatgcggataaagag
ggctttttacgttctgagcgtgccttgattcagaccattggtcgtgctgcgcgtcatatt
aatggtaaagccattctctatgccgaccgcattaccaacagtatgcaaaaagcgatcgat
gagacggatcgtcgccgtgaaaaacaagtcgcctttaaccttgaacataacatcacgcca
acaggcgcgcgccgtagtatcacagataaaattgatacaggcgatgaccatgatgccaac
gataatcagatgattcccattaagagcaacctgcctgatgtcgatatcagcatcttacgt
agtcctgatttgctggctaaagaaatcaatcgtcttgagaagcttatgaagcagatgtcg
cgtgatctgaagtttgaagatgcagcaaaaactcgcgataaagtgctagagttaaaagcg
catttgatttag
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