Psychrobacter sp. DAB_AL43B: DABAL43B_0980
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Entry
DABAL43B_0980 CDS
T04748
Symbol
rtcR
Name
(GenBank) Transcriptional regulatory protein rtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyc03000
]
DABAL43B_0980 (rtcR)
Transcription factors [BR:
psyc03000
]
Prokaryotic type
Other transcription factors
Others
DABAL43B_0980 (rtcR)
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
MCM
NACHT
AAA_16
AAA_30
AAA_14
RsgA_GTPase
AAA_7
ABC_tran
FtsK_SpoIIIE
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
SLJ84178
UniProt:
A0A1U6GL07
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Position
I:1132411..1134111
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AA seq
566 aa
AA seq
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MLQKNQNNKTAVIGFLGTTLDNGFNDKRWQRWRPTVSLGLHDELLVDELHILYSTRDKRL
FKIIKDDVAQVSPQTQVIGHHVSLSSPWDFADVYAELYDFAAAFDFQDNTDYLLHLTTGT
HVAQICWFLLVEAGFIPADLLQTSPCPRPDQADPQGRYQIIDLDVSRYDGLRARFEAEKQ
QHWQTLQANLVTQNAAYQKLISDIEKVATRSTAPILLMGATGAGKSQLASQIYALKKIKS
DSTAQAKYALNKFVEVNCATLRGDTAMSVLFGHVKGAFTGAASNRDGLLKSADNGLLFLD
EIGELGLDEQAMLLTALEEQRFYPLGSDAPINVSFQLMAGTNKDLRQAVANGEFRADLFA
RLNTWTFFLPSLKDRLEDLPANIDYELARLGSEQQQQYRFAPDARQLYESFAMSADATWQ
GNFRDLTASMIRLTTLAESKAIRVEDVQAEIERLKELWLLPISNILQSQNSLSGNEPKPA
LNRETVEQGSHIILNQYLDEGTLATIDPFDAVQLAYVIEVCIQHKNQATAGRYLYANSRD
KLKSPNDSDRLRKYLMKFDLRFDELG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgctccagaaaaaccagaataacaaaaccgccgtcatcggctttcttggtacgacttta
gacaatggctttaatgataagcgttggcaacgctggcggcctacggtgagtttgggtttg
catgatgagctgctggttgatgagctgcatattttatatagcacccgagacaagcgacta
tttaagattatcaaagatgatgtggcacaagtcagtccgcagacacaagttattggtcat
catgtctcgttatctagtccgtgggattttgcggatgtctatgccgaactgtatgatttc
gcggcagcgttcgattttcaagataacactgactacttactgcatctgactacgggtacg
catgtcgcgcagatttgctggtttttattggtagaggcaggatttattcctgctgattta
cttcaaacttctccatgtccgagacctgatcaagccgatccgcaaggtcgctatcaaata
atagatttagatgtctcgcgttatgatggtttacgtgcacgctttgaggcggaaaagcaa
cagcattggcaaaccctgcaagccaatcttgtcactcaaaacgctgcttatcaaaagctc
atctccgatatcgaaaaggttgccactcgttcaactgcaccaatacttctaatgggagca
acaggggcaggcaagtcgcaattggcaagccaaatctacgccctaaaaaagataaaatcc
gacagtacggcacaagctaaatatgctttgaataaattcgtcgaggtcaattgtgccact
ttgcgtggtgacacggcaatgagtgtgctgtttggtcatgtcaaaggcgcatttacgggt
gcagcgagcaatcgtgatggcctactcaaatcagcggataacggtttattattcttagat
gaaattggtgaattgggactggatgagcaagcaatgttattaacggcactagaggagcag
cgcttttatccgctaggtagtgatgcgccgattaacgtctcgtttcaactaatggcagga
accaataaagacttgcggcaagcggttgccaatggcgagtttcgtgcggacttatttgca
cggctcaatacgtggacattttttttgccatcgctgaaagatagactagaggatttacct
gccaatatcgattatgagctggcacgtttgggcagtgagcagcagcagcaataccgtttt
gcgccagatgcgcggcagctgtatgaatcctttgccatgagtgctgatgcgacatggcaa
ggcaactttcgcgatttgaccgccagtatgattcggctgactacgcttgctgaaagtaaa
gctattagagtggaggatgtgcaagcggagattgagcggttaaaagagttatggttacta
ccaataagtaatattctacagtcacaaaatagcctaagtggaaatgagcccaaacccgct
ttaaatagagaaacggtagaacaaggtagccatattattctaaatcaatatcttgatgaa
ggaactcttgcaactattgatccctttgatgcggtgcaattagcgtatgtgattgaggtt
tgtatccaacataagaaccaagcaacggctggacgctatttatatgctaactcaagagat
aagcttaaaagtccaaatgacagcgatcgtttgcgtaagtatctaatgaaatttgatttg
aggtttgatgagttggggtaa
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