KEGG   Psychrobacter sp. DAB_AL43B: DABAL43B_1097
Entry
DABAL43B_1097     CDS       T04748                                 
Symbol
clpB3
Name
(GenBank) type VI secretion system protein VasG
  KO
K11907  type VI secretion system protein VasG
Organism
psyc  Psychrobacter sp. DAB_AL43B
Pathway
psyc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psyc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DABAL43B_1097 (clpB3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psyc02044]
    DABAL43B_1097 (clpB3)
Secretion system [BR:psyc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DABAL43B_1097 (clpB3)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small Clp_N AAA_22 NBD_SMAX1 ATPase_2 AAA_7 TniB AAA_14 nSTAND3 IstB_IS21 Zeta_toxin AAA_29 HC2 Sigma54_activat T2SSE AAA_24 nSTAND6 NACHT ArsA_ATPase Rootletin HGD-D PIN
Other DBs
NCBI-ProteinID: SLJ84295
LinkDB
Position
I:1266551..1269475
AA seq 974 aa
MSQLKAVITRLSPSCRQCLQQAARLCINNGHREVDTVHLLHELIATPHNDVAQILKVNKI
NQHSLLAEITDLLNTFGQATGSTPVFSQDLMALLEDAWELASSQHSEHNHSPLEIRSGHI
LLVLLAYERYQPLLKALPEQLQYIDRFTLKDDYEHQCLGSTEGSGSANVNQSANKNTHKD
AEANTDNHESLDAEQANTKPTPALDKYTYDLTAKADAEQIDPVIGREFEIHQLIDILIRR
RQNNPILTGEAGVGKTAVVEGLAQKIVAGQVPDQLKEVTIRSLDMGLLQAGASVKGEFEN
RLKQVIEEVQASVQPIILFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWS
EYKKYFEKDAALSRRFQVVKVDEPDIETAVAMIRGLSAKMQEHFGILIDDDALQAAVELS
ARYISDRQLPDKAVSVLDTAAARVSLSKTAMPNQLDKLQAKGLQLEQHINNLSQQLERIG
GVDEKEKVSQKIAVLDELRQANQQSIADMTSRWHEQRKLNDQLDTLNKQLNGQLNTADTL
SAKARLDKQVEYQNTEQSLKQIQETQRLIHPVLDRQVIKQIISDWTGIPLNDMAGNEKNH
ILNLADTLQARIIGQDHSVAAIVKRIHTAKARLDDPNRPQGVFMLVGPSGVGKTETALAL
SEVLYGGERNLITINLSEYQEAHSVASLKGSPPGYVGYGEGGVLTEAVRRRPYSVLLLDE
VEKAHPDVLDLFYQVFDKGIMEDSEGRLIDFKNTLILLTSNIGSAQVMQQCINTDPSITD
FSLPDSDSLKQAINPHLYKAFKPAFLGRLTVIPYYPLTDDALAEIIRLKLDKITGRIRDN
YDVPCVIDPEVIELILSRCHEVDSGARNADAIISHTLLPQLAGQLLAHDDSQSVLKKITV
FVDEDDNFAYRLDTDAVVALNQMAQYSEDETEDQVEKSPSKPISAKKSTVKKPAIKKPIV
KKTASKKAIKEESL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgagccagttaaaagctgtaattacccgcttgagtccgagttgccgacagtgtttgcag
caggcggctaggctttgtatcaataatgggcatcgcgaagttgacaccgtccatctattg
catgagctgattgcgacgccgcacaatgatgtggctcaaatactcaaagtgaataaaatc
aatcagcattcattactagcagagataacggatctgctcaatacttttggtcaggcaaca
ggctcaacccctgtatttagtcaagacttgatggcgctgttagaagacgcatgggagctg
gccagtagccaacatagtgagcataaccatagcccactagagattcgttccggacatata
ttattggtgctattggcttatgagcgttatcagccattattaaaagcccttcctgaacag
ctacagtatatcgatcgttttacgctaaaggatgattatgagcatcaatgtcttggcagt
acagaaggcagtggctcggctaacgttaatcaaagcgcaaataaaaacacccataaagat
gctgaggctaatacagacaatcatgagtctttagacgcagagcaagcaaataccaagcca
acccctgcattagataaatatacctatgatttaaccgctaaagctgatgccgagcaaata
gatccagtcattggccgcgagtttgaaattcaccagcttatcgatattttgattcgtcgt
cgccaaaacaatcccatcttaaccggcgaggctggtgtcggtaaaacagcagtggtagaa
ggcttagcgcaaaagatagtcgccggtcaagtacctgatcagctcaaagaggtgacgata
cgtagtctcgacatggggctactgcaagctggggcgagcgtcaaaggggagtttgaaaac
cgtctaaagcaagtcatcgaagaagtacaagcttcggtacagccgattatactgtttatc
gatgaagcgcataccctcattggtgctggcgggcaggcgggtcaaaatgacgcggctaac
ttgctaaagcctgcactggctcgcggtgagctcagaaccatcgctgcgacgacttggtcg
gaatataaaaaatacttcgaaaaagatgcggcattatcacgtcgcttccaagtggtcaaa
gtcgatgagcctgatatcgaaacggcagtggcgatgattcgcggtctaagtgccaagatg
caggaacatttcggcatattaatagatgacgatgcgctgcaggcggcagtggagctatcg
gcacgttatatcagtgacaggcaactaccggacaaggctgttagcgtgttagatacggcg
gccgcacgggtgagcttatcaaagaccgccatgcccaatcagctggataagttacaagcc
aaagggttgcagctagagcaacatatcaataatctcagtcagcagcttgagcgtatcggc
ggcgtcgatgaaaaagaaaaggtcagtcaaaaaatagcggtgcttgatgagctgcgtcag
gccaaccaacaaagcattgctgatatgaccagccgctggcatgagcaacgcaagcttaat
gaccaacttgatacgctcaataaacaattaaatggccagctcaatactgctgatacgctt
agtgcaaaagcgcgcttggacaaacaagttgagtatcaaaataccgagcagtcgctaaaa
cagatacaagaaacgcagcgccttattcatcctgtattggatcggcaggtcatcaagcag
attatctcagattggaccggtattccacttaacgatatggcaggtaatgagaaaaaccat
atcttaaatttggctgataccttgcaagcacgcatcattggccaagatcattctgtcgcc
gctatcgtcaagcggattcataccgcaaaagcccgcctagatgatcccaaccgtccgcaa
ggggtgtttatgttagtagggccaagtggtgtgggtaagacggaaaccgcattggcgcta
tccgaggtattatacggcggtgagcgtaatctcattactattaatctatcagaataccaa
gaagcacatagcgttgcctcattaaaaggctcgccgccaggttatgttggctatggtgaa
ggtggcgtattgacggaagctgtccgccgtcgcccttatagtgtgttgctactcgatgaa
gtcgaaaaagcccacccagacgtattggatttattttatcaggtctttgataaagggatc
atggaagacagcgaggggcgtttaattgattttaaaaacacccttattttattgaccagt
aatattggttcagcgcaggttatgcagcaatgtatcaatactgatccgagtattacggac
tttagcttacccgacagtgatagcttaaaacaggccattaatccgcatctgtacaaagcc
tttaaacccgcgtttttaggtcgtctgacagtgataccttactatccattgactgatgac
gcgctggcagaaattattcgcttaaagctggataaaatcactgggcgtattcgtgataat
tatgacgtcccttgtgtcattgatccggaagtgatcgagctgattttatcgcgttgtcac
gaggtcgattctggtgcacgtaatgccgatgcgattatcagtcataccttgctaccgcag
ctggcgggtcagctgcttgctcatgatgacagtcagagtgtgctaaagaagattacagta
ttcgtcgatgaggacgataattttgcctatcgtctcgatactgatgccgtcgtggcgctc
aatcaaatggcgcaatacagcgaagatgaaactgaagatcaagttgagaaatcgccaagc
aaaccaatttcagccaaaaagtctaccgttaaaaagcctgccattaaaaagccgatagtg
aaaaaaacagccagtaaaaaggctattaaagaggagtcattataa

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