Psychrobacter sp. DAB_AL43B: DABAL43B_1340
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Entry
DABAL43B_1340 CDS
T04748
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DABAL43B_1340 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyc03019
]
DABAL43B_1340 (rhlB)
Enzymes [BR:
psyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DABAL43B_1340 (rhlB)
Messenger RNA biogenesis [BR:
psyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DABAL43B_1340 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SLJ84536
UniProt:
A0A1U6GM31
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All DBs
Position
I:1512711..1513865
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AA seq
384 aa
AA seq
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MSNFTTFTDLPLSAATLRAVGDLGFTKLTPIQAQILPHTLANQDAIGQAQTGTGKTATFL
LTIMEALLKRPFATDEERYLGEPRAVVMAPTRELAQQIFDDCIALTKYTSLHSVCIMGGT
NYETQQHELERQYVDILVATPGRLIDLMNKGMVYLDRVEVLVLDEADRMLDMGFIPDIKR
LVGRMPPNTDRQSLLFSATFNQDVMNLAYRWLHEPQFVEIEPEHKTSELVDQHFYLLTED
QKLEALERIITDTAVEKVIVFANRKDQVKRLYHKLRQGHKIVMLSGDVIQQKREKYLQRF
KDGHASILVATDVAGRGIHVDDVSHVINYTLPDQPDDYVHRIGRTGRAGQTGISISFVSE
DDAFNIPALEKHLDTKFSLEQWQQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaactttacgacgtttacggatttgccactttcagcagctactttacgcgcggta
ggcgatttgggttttactaaactgacacccattcaagcacagatactaccgcatacccta
gcaaatcaagatgctattgggcaagcacaaacgggtactggcaagacggcaacgttttta
ctgaccataatggaggcgttacttaagcgtccttttgcaacggatgaagagcgttattta
ggtgagccacgtgcagtcgttatggcaccaacccgtgagcttgctcagcaaatatttgat
gattgtatcgccttgaccaaatacacctccttacatagcgtctgcattatgggtggtacc
aattatgaaacccagcagcatgagctggagcgtcaatatgtcgatattttggttgcaacg
cctgggcgtctgattgatttaatgaataaaggcatggtatatcttgatcgtgtcgaagtg
ctggtattagatgaagcagatcgcatgctggatatgggttttatcccagatatcaagcgc
ttagtcggtcgtatgccgcccaataccgatcgtcaaagcttgttattttctgccaccttt
aaccaagatgtgatgaatttggcttatcgctggttacatgagccacagtttgtcgaaatt
gagcctgagcataagaccagtgagctggtagaccagcatttttacttgttaacagaagat
caaaaactagaagctttagagcgtatcatcactgataccgcagtagagaaggtgattgtt
tttgccaatcgtaaggatcaagtaaaacgtctgtaccataagctacgccaagggcataaa
atcgttatgctatcgggcgatgtgattcaacagaaacgcgaaaagtatttacagcgcttc
aaagacggtcatgcatcgattttggtagcgaccgatgtagcaggacgcggtattcatgtc
gatgatgttagccatgtgattaactatacgttgccagatcagccagatgattatgtacac
cgcattggtcgtacagggcgtgctgggcaaacaggtattagcattagctttgtgagtgaa
gatgatgcttttaatatacctgcactagagaagcatttagatactaagtttagtcttgag
cagtggcagcagtag
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