Psychrobacter sp. DAB_AL43B: DABAL43B_1515
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Entry
DABAL43B_1515 CDS
T04748
Name
(GenBank) Long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc00061
Fatty acid biosynthesis
psyc00071
Fatty acid degradation
psyc01100
Metabolic pathways
psyc01212
Fatty acid metabolism
psyc02024
Quorum sensing
psyc04146
Peroxisome
Module
psyc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DABAL43B_1515
00071 Fatty acid degradation
DABAL43B_1515
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DABAL43B_1515
09145 Cellular community - prokaryotes
02024 Quorum sensing
DABAL43B_1515
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psyc01004
]
DABAL43B_1515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyc04147
]
DABAL43B_1515
Enzymes [BR:
psyc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DABAL43B_1515
Lipid biosynthesis proteins [BR:
psyc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DABAL43B_1515
Exosome [BR:
psyc04147
]
Exosomal proteins
Exosomal proteins of breast milk
DABAL43B_1515
Exosomal proteins of breast cancer cells
DABAL43B_1515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Rieske_4
Motif
Other DBs
NCBI-ProteinID:
SLJ84710
UniProt:
A0A1U6GML1
LinkDB
All DBs
Position
I:complement(1731816..1733501)
Genome browser
AA seq
561 aa
AA seq
DB search
MDKFWTQSYPSGVEAEIAPLHNTIIDIFDDKLSEYANQDFITNMGVTYTYGQIDKISLTI
AAWIQSLGLAKGSVIGIMMPNVNQYLPVVIGVIRAGMVTTLINPLYSPRELKHQLVDSNA
SAIFILEPFCKTLEKIVKETPVKTVVISKIGDMLGSAKGALVDIAAKYVKKAIPSYELKS
NPSYKVISYKSVLKQAKSLPYSRPTAEADDLLMLQYTGGTTGVAKGILITNRNVAIATYQ
FIEWFKPVYANMSANTQMHSIIALPLYHIYAFICSMVGLSMGQHLTLITNPRDIPGFVKI
LAKRPFHLLPGVNTLFQALVNNAEFRKLDFSECKLTLVGGMAATPETAKRWLEVTGLPIL
EGWGMSETLGVGTANPFDGTEYSGNVGLPLPGVDIDIRDDEGNILTIGEVGEMCIKGDNV
ITHYHNMDSSQFFTADGYLKTGDIASMNEQGAIKIYDRKKDMIIVSGFNVYPNEVENVIE
AHPKVAECSVVGVEDELQGQSIKVYIVKSDKSLNESDIKAFCKESLAAYKCPRHIEFIAE
LPKSTVGKILRHELRKAANQA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggataagttttggacacagagttaccccagcggagtagaagcagagatagcgccgtta
cataatacaattattgacatcttcgatgacaaactatctgaatatgccaatcaagatttt
attactaatatgggagtcacttacacctatgggcaaattgacaaaatatcattaactata
gccgcttggattcaaagtctaggactagcgaaggggtcagttatagggattatgatgcct
aatgtcaatcaatacctacctgttgtcataggagtgattcgtgcgggcatggtaacgacc
ttaattaacccactgtacagtccccgtgaattaaagcaccaattggttgattctaatgcg
tcagcaatatttatcttagaacccttctgtaaaacgctcgaaaaaatagttaaagagaca
ccagtcaaaaccgtggtcattagtaaaataggggatatgctcggatctgcaaaaggtgca
ctcgtagatatcgccgcaaaatatgtaaaaaaagcaattccaagctacgagttaaaatcc
aatcctagttataaggtgattagctataaatctgtcttaaaacaagccaaaagcttaccc
tattctcgacctactgcagaagccgatgacttgctgatgttgcaatataccggcggcact
actggtgtagctaaaggtattttaatcactaatcgaaatgttgcgatagccacttaccag
ttcattgaatggttcaaacctgtttatgccaatatgtctgctaatacgcagatgcacagc
attattgctttgccgctttatcatatctatgcttttatttgctcgatggtaggattaagt
atggggcaacacctgactttaatcaccaatccacgtgatatccctggtttcgtcaagata
ttagccaagcgtcctttccatctattgcctggcgttaacaccttgtttcaagccttagtg
aataatgctgaatttaggaagttggacttttctgaatgcaaattgaccttagtaggcggt
atggctgcgacacccgaaacagctaagcgctggcttgaagtcaccgggttacctatcctt
gaaggttgggggatgtcggagacgcttggggttgggaccgctaatccattcgatggtact
gagtacagtggtaacgtcggcttgcctctacctggagtagatatcgatattcgggatgat
gagggtaatatccttaccataggtgaggttggtgagatgtgcatcaaaggcgataatgtc
attacacactatcataatatggatagtagtcaattttttaccgcagatggctatttaaaa
acaggtgatatcgcttctatgaatgagcagggcgctatcaagatctatgaccgcaaaaaa
gacatgattatcgttagcggttttaatgtttaccctaacgaagtcgaaaacgtcatcgaa
gcacatcccaaggtagccgaatgttcggtagttggtgtagaagacgagttacaaggtcaa
tcgatcaaagtttacatcgtaaaatctgataaaagcttgaatgaaagtgatattaaagcg
ttctgtaaagaaagtttggcggcctataaatgcccacgccatatcgagtttatagctgag
ctacctaaatcaaccgttggcaaaatactgcgccatgagctgagaaaagcggctaatcaa
gcttag
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