Psychrobacter sp. DAB_AL43B: DABAL43B_1608
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Entry
DABAL43B_1608 CDS
T04748
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03030
DNA replication
psyc03430
Mismatch repair
psyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DABAL43B_1608 (dnaE)
03430 Mismatch repair
DABAL43B_1608 (dnaE)
03440 Homologous recombination
DABAL43B_1608 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyc03032
]
DABAL43B_1608 (dnaE)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_1608 (dnaE)
Enzymes [BR:
psyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DABAL43B_1608 (dnaE)
DNA replication proteins [BR:
psyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DABAL43B_1608 (dnaE)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DABAL43B_1608 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
SLJ84803
UniProt:
A0A1U6GMP8
LinkDB
All DBs
Position
I:1854036..1857782
Genome browser
AA seq
1248 aa
AA seq
DB search
MAFVHLGIHSEYSITDSIVRIKPLIKAAAADNQSALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMENEDTRLTLLAMDNEGYQNITRIVSLGFTEGRADPTNHGTPVIKRSHILEH
AAGVIVLFTEKSDVGQALVGSMPEKADELITEWQEQFGDRLYFAIKRTNRSGEDAFINAA
IHAGAKHNIPIIAHNDVRFLEQDDFDAHEARVCIAGSYVLADQNRPQTYSDAQYLKTQAQ
MQQLFADIPQVVDNTLRLATRCNVTLTLGINVLPEFPVPEGETTESFFRLESQRGLEHRL
EKLFPMEARSDNWSDIRQRYDERLEYELKIILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARAQSKSYFLASKMSKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDATEVWEMAIKLEGICRNVGKHAGGVLIAPHKITDFSAIYCDDEGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVISAAVENINKRRAKENKEALVLEDLPLDDAKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFITGATSQGIDEATSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFDLTVVNPSVNRSEWHFVADTATNIIYGLGAIKGV
GEGAVESIVEARRRDGYFKDLYDFCRRVDIKKVNKRTLEALVSAGCFDDFAATLRPDLPA
DEAYEIRGALMSQLPSAVQAAEQDRQNREIGMMDLFGEMDGIVAAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPINEYLDELKRYTSGARLDKLADTGYNGSCYFAGLIIDIANFGN
RNVIILDDGTSRLEVSCYAERFNRVKEQLKVDEVVIIKGSIRERDGRLFARLDNAMSMVD
ARLRWLKKISIKVHGSDITLLTRLQPLLKSAQASIIPAPKLSYDNDQDEQGSHINNSNNG
AYDPAMGGSLYDEDGNDLLALENDMNQDSIYQNSANQSVSEQSYANHALSNTDASINDNC
LPLGLSIYEEYGIANVGLSEHWRVYPSDDNLQQLKSMISENNLHFHYS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtacaccttggcatccacagcgaatattcaattaccgattctatcgtccgt
attaagccgttgattaaagcggcggcggcagacaatcaaagcgcgcttgccttgaccgat
ttatccaatctttatgctacggtaaagttttaccgtgcctgcttaggtgctggtatcaag
ccaatcatcggtagtgaagtcatcatggagaatgaagacacgcgcctaactctgctagca
atggataacgaaggttatcaaaacatcacccgtattgtatcgcttggctttaccgaaggt
cgcgccgaccctaccaatcatggcacgcctgtcatcaagcgcagccatattttagagcac
gcggctggtgtcatcgtcttatttaccgaaaaatctgatgtcggtcaagcgttagttggc
tctatgccagaaaaagccgatgagctgattacagaatggcaagaacagtttggcgatcgc
ctatattttgctattaagcggaccaatcgctcaggtgaagacgcttttattaacgctgct
attcatgccggtgctaaacacaatatacctattattgcccataacgacgtacggttttta
gagcaagatgattttgatgctcatgaagcgcgggtttgtattgctggctcctacgtactt
gcagaccaaaatcgtccgcaaacttattccgatgcgcaatatcttaaaactcaagcacaa
atgcagcagttgtttgccgatattccacaggttgtcgataatactttgcgcttagcaacg
cgctgtaatgtgactttgacacttggtataaacgtgctgccagagtttccagtacctgaa
ggtgaaaccaccgagtctttctttcgcttagaatcgcagcgcggacttgaacatcgttta
gaaaagctatttcctatggaagcacgtagtgataactggagcgatattcgccaaagatat
gatgaacgtctagagtatgagctaaagattatcctatcaatgggcttccccggttacttc
ttaatcgtcatggactttattcgctgggctaaagccaatggcgtgcctgttggaccgggt
cgtggttcaggtgctggttcgctagttgcttatgcgctaaatattactgatcttgaccct
atccattacgacttattatttgagcgcttcttaaaccctgagcgcgtatccatgcccgat
ttcgatattgacttttgtattgaaggacgtgatcgtgtgattgattatgtggctcaaact
tacggccgagaagcggtatcgcaaatcattacctttggtactatggccgcaaaagctgtg
gtacgtgacgtcgcgcgcgcgcaaagtaaatcgtactttcttgccagtaaaatgtccaaa
ctgatacctaagacacccggtattacgctcagtcaagcgcttgaacaagagccgcagtta
aaagacttaatctccaatcctgataatatggattatgaagatgccactgaagtgtgggag
atggccattaagcttgaaggcatttgccgaaacgttggtaagcatgctggtggtgtattg
attgccccgcataaaatcaccgattttagtgccatttattgtgatgatgaaggacaccgt
gtcagtcaatttgataaagatgacgttgaagcagttggtctggtaaagtttgactttttg
ggtctgcgtaacttaacggtcattagtgccgccgttgaaaacatcaataagcgccgtgct
aaagagaacaaagaggcgttggtattagaagacttaccattagatgacgctaaagcttat
aagctcttgcaagatgccaaaaccactgccgtctttcagttagaaagtatgggcatgaaa
aagtatcttgccaagttgcaaccgactaacatcgaagacgttatcgctatgtgcgcgctg
tatcgtccaggtccgctcgatgcgggtatggtagagatgtatatcgaccgtaagcacggt
cgcgaagaagtcatttatgaccatcccaatcttgagccaattttagaaaacaccaacggc
gttatcgtctatcaagaacaagtgatgcaaatctcgcaggtaatggctggctatagctta
ggtggtgctgatatgctccgccgcgctatgggtaagaaaaagcctgaagagatggctaag
cagcgcgatatctttattacaggtgcaacctcacaaggtatcgatgaagccacctcgggc
ggcgtgtttgacctgatggaaaaattcgccggttacggctttaaccgctcgcattcagcc
gcttatggtgtgctggcttatcagacggcctatttaaaacaatactaccctgctgagttt
atggcagcagtactgacttcggatatgaacaacaccgataacgtggtgttctttatcaat
gattgccgtgaaaacttcgatttaaccgtggttaatccgtctgttaaccgtagtgaatgg
cattttgtcgctgataccgcgaccaatatcatttacggcttgggtgcgattaaaggcgtt
ggtgaaggtgcggttgaatctattgtagaagcgcgccgccgcgatggctatttcaaagat
ttatatgacttttgtcgccgtgtcgatatcaaaaaagtcaataagcgcacccttgaggca
ttagtaagtgctggctgttttgatgacttcgccgccactttacgacctgacttgccagcc
gacgaagcttacgagattcgtggtgcattaatgagtcaattgccaagcgcagtacaagcc
gctgagcaagaccgtcaaaaccgcgagatcggcatgatggatttgtttggtgagatggac
ggtatcgtcgctgcgccgccgttggtgatgactccagagctgatttggggtgataagcat
cgcttaaaagctgaaaagaataccttggggttatacctgaccggacacccaattaatgag
tatttagatgagctaaaacgttatacctcaggcgcacgtctcgataagttagctgatacc
ggctacaacggcagctgttattttgccggcttgattatcgatatcgccaacttcggtaat
cgtaacgttattatcttggatgacggtacgtcaagattagaagtcagctgctatgctgag
cgctttaaccgtgtcaaagagcaattaaaagtcgatgaagtcgtcattattaaaggcagt
attcgtgagcgtgatggacgcctatttgcgcgccttgataatgccatgagtatggttgat
gcacgcctaagatggctgaagaaaatcagcattaaagtccatggtagcgatattaccctg
ttgacacgcctgcaaccgttactcaagtctgcacaagccagcattattcctgcaccaaaa
ctgtcttatgataacgatcaggacgagcaaggtagccatattaacaacagtaacaatggt
gcttacgatcctgctatgggtggcagcttatatgatgaagatggtaacgatttattggct
cttgaaaacgatatgaatcaagattctatttatcaaaacagtgctaatcaaagcgtttct
gaacaaagctatgccaatcatgctcttagcaatacagacgcttcgatcaatgataactgt
ctgccgcttggactcagtatttatgaagaatatggcattgccaatgtagggttgtcggag
cattggcgcgtctatccgagcgatgataatttacagcagctaaaaagtatgattagtgaa
aacaacttacactttcattacagctaa
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