Psychrobacter sp. DAB_AL43B: DABAL43B_1929
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Entry
DABAL43B_1929 CDS
T04748
Symbol
hupB
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyc03032
]
DABAL43B_1929 (hupB)
03036 Chromosome and associated proteins [BR:
psyc03036
]
DABAL43B_1929 (hupB)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_1929 (hupB)
DNA replication proteins [BR:
psyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DABAL43B_1929 (hupB)
Chromosome and associated proteins [BR:
psyc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DABAL43B_1929 (hupB)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DABAL43B_1929 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
VWA_3
Motif
Other DBs
NCBI-ProteinID:
SLJ85121
UniProt:
A0A1U6GNN5
LinkDB
All DBs
Position
I:complement(2248927..2249199)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDSIAEKSGLNKTQAGDALNAVMESVGEALEAGDSISLVGFGTFSVKDRKARTG
RNPKTGEELSIPASKVPSFKAGKNLKERLN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtcagaattaattgatagcatcgctgaaaaaagtggtctaaataaaactcaa
gctggtgatgctttgaatgctgttatggaaagcgtgggcgaagctctagaagctggcgat
agcatctcacttgttggttttggtactttcagtgtaaaagaccgtaaggctcgcactggc
cgtaaccctaagactggtgaagagctgagcattccagctagcaaagtaccaagctttaaa
gctggtaaaaacttaaaagagcgcttgaactaa
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