Psychrobacter sp. DAB_AL43B: DABAL43B_1993
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Entry
DABAL43B_1993 CDS
T04748
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyc03009
]
DABAL43B_1993 (rimO)
Enzymes [BR:
psyc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DABAL43B_1993 (rimO)
Ribosome biogenesis [BR:
psyc03009
]
Prokaryotic type
ribosomal protein modification factors
DABAL43B_1993 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
YajR_YAM
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
SLJ85185
UniProt:
A0A1U6GNT4
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Position
I:complement(2334465..2336066)
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AA seq
533 aa
AA seq
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MPKTSTESVNTTITTSQPASMSTASMPKDTATIFNPAKPAMVQEQLKTDNVEPYHHKANH
NQNRSIAQSGDATIHATTSATASSPTTAAPKIGFVSLGCPKALVDSERIITELSRDGYQV
ASDYEGADLVVVNTCGFIESAVQESLDAIGEAISKNGKVIVTGCLGKEADKIRAMHPAVL
AVTGAHAYDEVIRAVALHVPKPDRSNDKDYNPKIDLINEAGIKLTPSHYAYLKISEGCNH
RCTFCIIPSLRGDLVSRPIDSVMNEAMALKNAGVKELLIISQDTSAYGLDLKYKTSFWNG
MPLKSKFYDLCQALNDLGIWVRLHYVYPYPHVDKVVQLMGEKKLLPYLDIPFQHASHSIL
KAMKRPAHSENTLARIKAWREICPDIVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVG
AFTYSEVEGAVANELPNHVPEAIKQERYERLMTLQQDISAQKLQEKIGKTLMVLVDEIDF
DEGVAICRSYADAPEIDGHVYVDDITAAVKVGQFLTVTIDDASEYDLFASYKG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacttctaccgagtccgttaacacgactatcactacctcacagccagcttct
atgtcaacagcttctatgccaaaagacactgccaccatttttaatcctgccaagccagca
atggtgcaagagcagcttaagacagataatgtcgagccttaccatcataaagccaatcat
aatcaaaaccgtagtattgcccaaagtggtgatgcgactatacatgcaaccaccagcgcg
acagcctctagtccaacaacggcagcgccaaagattggttttgtctcgctaggttgccca
aaagccttggtggatagtgagcgcattattactgagcttagccgtgatggttatcaagtc
gccagcgactatgaaggcgcagacttggtcgtggtcaatacttgtggctttattgaatca
gcggtacaagagtcgctagatgccatcggtgaagcgattagcaaaaacggtaaagttatc
gttacgggttgcctcggtaaagaagcagataaaatccgtgcaatgcatcctgctgtatta
gcagtgactggcgcgcacgcttatgacgaagtgattagagcagtcgcgctgcatgtgcct
aagcctgaccgtagtaatgataaagattataatcctaagatagatttgattaatgaggcg
ggtatcaaattaacgcccagtcattatgcttatctgaaaatatcagaaggctgtaatcat
cgttgtactttttgcattattccaagcttacgcggtgatttggtttcgcgtccgattgat
agcgtgatgaatgaagccatggcactgaagaacgctggcgtgaaagaactattaatcatc
tcgcaagatacgtccgcgtatggtttagatttaaaatataagaccagcttctggaatggt
atgccgctgaagtctaagttttatgacttatgccaagcgttgaacgatttgggtatttgg
gtacgtctgcattatgtctatccgtatccgcatgtcgataaagtcgttcaattaatgggt
gaaaagaagctactgccttaccttgatattccctttcagcatgccagtcatagcatctta
aaagccatgaagcgtcccgcccatagcgaaaacaccttggcgcgtattaaagcatggcgt
gagatttgtcctgatatcgtgattcgctcaaccttcgtcgttggcttcccaggtgagact
gaagaagatttccaatgtctgcttgactggttagtcgaggcacgccttgatcgcgttggt
gcttttacttattcggaagtggaaggcgcggttgctaatgaattgcctaatcatgtacct
gaagccattaagcaagagcgttacgagcgtttgatgacgttacagcaagatatctctgcg
caaaaactgcaagaaaaaatcggtaaaaccttaatggtattggtcgatgagattgatttt
gatgagggtgttgcgatttgccgtagctatgcagacgcgccagaaattgatgggcacgtc
tatgttgatgacattactgctgcggtaaaagtagggcagttcttaacggttactattgat
gatgccagcgaatatgacttatttgccagttataagggttaa
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