Psychrobacter sp. DAB_AL43B: DABAL43B_2004
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Entry
DABAL43B_2004 CDS
T04748
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A, type II topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyc03032
]
DABAL43B_2004 (gyrA)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_2004 (gyrA)
Enzymes [BR:
psyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DABAL43B_2004 (gyrA)
DNA replication proteins [BR:
psyc03032
]
Prokaryotic type
DNA Topoisomerases
DABAL43B_2004 (gyrA)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DABAL43B_2004 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SLJ85195
UniProt:
A0A1U6GNU8
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All DBs
Position
I:complement(2346348..2349152)
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AA seq
934 aa
AA seq
DB search
MSESVSPIGIVDELKQSYLDYAMSVIVSRALPDVRDGFKPVHRRVMYAMHVLSNDYNKPY
KKSARVVGDVIGKYHPHGDSAVYDAIVRMAQDFSLRYPMVDGQGNFGSIDDDPPAAMRYT
EVRMTKLTHQMLADLDKDTVDWEDNYDGSERMPSVMPARVPNLLVNGATGIAVGMATNMA
PHNLTEVINACLAYANNPQISAEELMTHISGPDFPTGGIIYGRAGILDAYRTGKGRLHIR
GRYHIEPMTDTGVNRDRERIVFTEVPYQSNKAKMIERIAELVRDKKIEGISEIRDESDKD
GMRIAIDLRRGETAEVIVNNLFLQTPLESSFSINMVALDNGQPKLLTLRQLIAAFVRHRQ
EVVTRRTIYELNKARVRGHLLEGLTVALANIDEIIAAIKASASRAMARENLLDNTWGSGS
VVAMLEAAGSQSVRPDYIEGEDPKAPFGLVEGEERYRLSLDQVNAILDMQLHRLTGLEQD
KLTEEYQDLLREIANLESILGDFDKLMTIISNEMIEIRDNFGDERRTDIVDSRTDFSRED
LIPEQTVVMTVSRTGYAKTQPIDDYVAQKRGGKGKSATAMKEDDVIDHLVVTSTHSTVLC
FTDTGRVFSLRGFEVPIASRGARGRPLVNLIGLNADETVTTILPIPKIVEELSAKDDMSL
VDVADRTDSDSDDDSLESSNEAQPPFVFFATANGTVKRVELKQFANIRSNGLIAVGLEEG
DKLVSARITDGSQEVMLFASSGKAIRFDENDARAMGRTAKGVRGMRLANDEFIKSLVVIE
DDVREILIACENGFGKRTFIEEFNKQGRGGGGVIAIKTSARNGALVRATKVEPEDDIILI
SDKGTLVRTPVQHVASSGRNTQGVTLIRLSKDEKLVAMARVEHEEGDNELIDAMREDGTF
DVEGQEQIDIDAANIDAAETDVNESNHSETDTDE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcggtcagtcctattggcatcgtagatgaactaaagcaatcctatctggat
tatgcgatgagcgtgatcgtctcacgtgcgctgcctgatgtgcgtgatggcttcaagcct
gtacaccgccgtgtgatgtacgctatgcacgtgctatctaacgactataacaagccatat
aaaaaatcagcccgtgtggtcggggacgtcatcggtaaatatcacccgcatggcgatagt
gcggtttatgatgcgattgtgcggatggcgcaggattttagcttgcgttatcctatggtt
gatggtcaaggtaactttggttcgatcgatgatgatccaccggcagcgatgcgttatacc
gaagtgcgtatgaccaagctgacccatcaaatgctggcagatttggataaagacaccgtc
gactgggaagataactacgatggttctgagcgtatgcctagcgtcatgccggcacgcgtt
cctaacttgctggtcaatggtgcaactggtattgctgttggcatggcgaccaatatggca
ccgcacaacctcaccgaagtgattaatgcgtgtttggcttatgccaacaatccgcaaatc
tctgctgaggagctgatgactcatatctcaggtcctgactttcctacaggcggtattatt
tatggtcgcgcgggcattttagatgcctatcgtacgggtaaaggtcgtttacatattcgc
ggtcgctatcatattgagccaatgacggacaccggtgtcaaccgtgatcgtgagcgtatt
gtcttcaccgaagtaccgtaccaatctaataaagctaagatgattgaacgtattgctgaa
ttagtacgcgataaaaaaattgaaggcattagcgaaatacgtgatgagtctgataaagat
ggcatgcgtatcgccattgacttgcgccgcggcgaaacagccgaagttattgttaataac
ttgtttctacaaacgccacttgagtccagctttagtatcaatatggtggcgctcgataat
ggtcagcctaagctattgacgttgcgtcagctgattgctgcgtttgtacgtcatcgtcaa
gaagtcgtgacccgccgcactatttacgagcttaataaagcgcgtgttcgtggtcatttg
ctcgaaggcttaaccgttgcactggcgaatattgacgagattattgcggctattaaagcg
tccgctagtcgcgctatggcccgtgaaaacttgctcgataatacctggggctcaggtagt
gtagtcgcaatgctagaggcggctggtagccagtcagtacgacctgattatatcgaaggt
gaagatccaaaagcaccgtttggtcttgtcgaaggcgaggagcgctatcgtttatcacta
gatcaggttaatgccattttagacatgcaattgcatcgtctcacgggtcttgagcaagat
aaattgaccgaagaatatcaggatctattacgtgaaatcgcgaatttagagtctattctt
ggtgatttcgacaagctaatgaccattatttctaacgagatgattgagattcgtgacaac
tttggtgatgagcgccgtacggatatcgttgattcacgtactgactttagccgcgaagat
ttgattcctgaacaaaccgttgtgatgaccgtatcgcgtacgggttatgctaaaacgcag
cctatcgacgattatgtggcgcaaaagcgtggcggtaaaggtaaatctgcgaccgccatg
aaagaagacgatgtgattgaccatttagtcgtaacctctactcactcgacggtactgtgc
ttcacagatacgggtcgtgtgtttagcttacgcggttttgaagtgcctattgccagtcgc
ggcgcccgtggtcgcccattagtcaatcttattggcttgaatgctgatgagacagtcacg
acgatattgcccattccaaaaatagtggaagagttatctgcgaaagacgatatgtcacta
gtagatgttgccgatcgtacagatagcgatagtgatgatgattcattagaaagcagcaat
gaagcacagccaccgtttgtattctttgcgacagccaatggtacggtgaagcgtgtagag
ctcaagcagtttgccaacattcgctcaaacggtcttattgccgttggtctagaagaaggc
gataaattggtaagcgctcgtatcactgacggtagccaagaggtgatgttgtttgcctca
agtggtaaagccatccgttttgatgaaaatgatgcgcgcgctatgggtcgtacggcaaaa
ggcgttcgtggtatgcgtctggctaatgatgagtttattaagtcattggtggttatcgaa
gatgacgtacgcgaaattctgattgcttgtgaaaacggttttggtaaacgtacctttatt
gaagaatttaataagcaaggacgtggcggtggcggtgttatcgcgattaaaacaagcgcg
cgtaatggtgcgttagttcgtgcgaccaaggtcgagcctgaagacgatattatcttaata
tcagataaaggcacactagtccgtacgccagtgcagcatgtcgccagttcgggtcgtaat
actcaaggtgttaccttaattcgtctgtcaaaagatgagaagctggtcgctatggcgcgt
gttgaacacgaagaaggcgacaatgaactaatcgatgcgatgagagaagacggtacgttt
gatgtagaaggtcaagagcagatcgatattgatgcggcaaatattgatgctgcagaaaca
gatgtcaatgaatctaatcattcagaaactgacactgacgaataa
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