Psychrobacter sp. DAB_AL43B: DABAL43B_2050
Help
Entry
DABAL43B_2050 CDS
T04748
Symbol
pbpA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc00550
Peptidoglycan biosynthesis
psyc01100
Metabolic pathways
psyc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DABAL43B_2050 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DABAL43B_2050 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyc01011
]
DABAL43B_2050 (pbpA)
Enzymes [BR:
psyc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DABAL43B_2050 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psyc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DABAL43B_2050 (pbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
DUF1687
Phage_tube_C
Motif
Other DBs
NCBI-ProteinID:
SLJ85239
UniProt:
A0A1U6GNY9
LinkDB
All DBs
Position
I:2412379..2414391
Genome browser
AA seq
670 aa
AA seq
DB search
MKKPLTPDTEQVNSIFTSRIVILGLLMFLGLMGLIMRYGYLQVYAHDKYTTQADNNRIKL
ISAPPSRGYIYDRNGIILADNQPVFTAMLSPDEVENPERTLNLLAPIFDLTDENITDILA
RLSKSKNDPVTIKIDLTDAQLAQFSERKPFFRGVSIQSKLTRSYPYDELFAHVIGYVGRI
NDKESKQINKDRYAGTDLIGKIGIEDFYEDILLGQPGYQSVETDAYGNILRQLDTKPPIA
GNDITLSLDYGLQTVAQQQLDGRRGAIVAIDPKNGDVLAFVSNPSYDPNPFISGISFKDY
GNLREDLDQPLYNRALQGTYPPGSTIKPFEALGGIHYGLRNWETTIYDPGYFSLPGDSHR
FRDWKKGGHGTVDLKKSIMMSVDTYYYKLAYEMGIQRLHDWMVRFGFGEETGIDLPNEKS
GIMPSPKWKKDTYDKGWLPGETISVSIGQGYFLATPLQIANATAMTANQGNHITPHLLKS
SDGAAAVDVITKPDGKIDYNGKPSDWLRMHDAMEQTVKAGTGRGIYTPRYRIAGKTGTAQ
VKSIAQGKSYNKSALDKRHWDHAWFNGFAPVEDPEIALAVLVENGGGGSVVAAPIGRALF
DYWVLQRKSNPILPPTADQLKVIKRQKSFEKLMRDAIRDKEDKALEAEKAKQEEKQKEQI
QAATTTASAE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaccgctaactcccgataccgaacaggtcaacagtatttttaccagtcgaatt
gttatccttggattattgatgtttttgggtttgatgggtttaataatgcgttatggttat
ttacaagtgtatgcccacgataaatacaccacccaagcggataataatcgcattaagctg
atttctgccccgccaagccgtggctatatttatgatcgtaatggaatcattcttgcggac
aatcagcctgtatttaccgccatgctcagtcctgatgaagttgaaaacccagagcgcacc
ttaaatttactggcgcctatttttgatctgacggatgaaaatattaccgacattctagcg
cggctaagtaaaagtaaaaatgatccagtgacgatcaagattgacttaaccgatgcgcaa
ttggcgcagtttagtgaacgcaaacctttctttcgcggggtcagtatccaaagtaagctg
acgcgctcttacccttatgatgaactgttcgcacacgttatcggctatgtgggacgcatc
aacgacaaagagtctaagcaaataaataaggatcgctatgccggtaccgatcttatcggc
aagattggcatcgaagatttttatgaagatattttacttgggcaaccaggttatcagtcg
gtagaaaccgatgcgtatggcaatattctacgtcaactcgataccaagccaccgatcgcc
ggtaatgatattaccctaagcttagactatggcttacagactgtggcccagcagcagctt
gacggtcgtcgcggcgcgattgtggcgatagatccaaaaaacggcgacgtattagcgttt
gttagtaacccaagctatgaccccaacccttttatctccggcatctcttttaaagactat
ggcaatctgcgcgaagaccttgatcagccactatataatcgcgccctacaaggtacttat
cctcctggctcgaccatcaaaccctttgaagccttaggtggtattcattacggtttacgt
aattgggaaaccactatttatgatcctggttattttagcttgcctggagattcacaccgt
tttcgcgattggaaaaaaggcggtcacggtaccgtcgatctaaaaaaatctatcatgatg
tcggtggatacttattattacaaactggcttatgaaatgggcattcagcgcttgcatgac
tggatggtgcgttttggtttcggtgaagaaaccggtattgacttgcccaatgaaaaatct
gggattatgccatcaccaaaatggaaaaaagacacctacgataaaggctggttaccgggt
gaaactatctcggttagtatcggtcaaggttatttcttagcgacgcccctacagatcgct
aatgcaactgccatgaccgcgaatcaaggtaatcatattactccgcacttgttaaaaagt
agcgacggtgcagcggcagtcgacgtcatcaccaaaccggatggcaagattgattataat
ggcaaaccatctgactggctacgcatgcatgatgccatggaacaaacggtcaaagcaggt
actggacgtggcatctatacgccgcgctatcgtatcgccggcaaaacgggcacagcacag
gtaaaatcaattgctcagggtaaaagctataataaatccgcgctggataagcgccactgg
gatcatgcttggtttaatggttttgcaccagtagaagaccccgaaattgccctagcggta
ttggtcgaaaacggcggtggtggtagtgtcgttgctgctcctattggacgcgctttattt
gactattgggtattacaacgcaaatctaaccctatcttgccgccaactgctgatcagtta
aaagttattaagcgccaaaaatcctttgaaaaattgatgcgtgatgctatacgtgataaa
gaagacaaagcattagaagcagaaaaagcaaagcaagaagaaaaacagaaagaacaaatt
caagctgctacgaccacagcaagcgctgagtaa
DBGET
integrated database retrieval system
