Psychrobacter sp. DAB_AL43B: DABAL43B_2185
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Entry
DABAL43B_2185 CDS
T04748
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyc03032
]
DABAL43B_2185 (topA)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_2185 (topA)
Enzymes [BR:
psyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DABAL43B_2185 (topA)
DNA replication proteins [BR:
psyc03032
]
Prokaryotic type
DNA Topoisomerases
DABAL43B_2185 (topA)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DABAL43B_2185 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_TFIIB
Toprim_4
Toprim_C_rpt
Toprim_2
O-FucT
Motif
Other DBs
NCBI-ProteinID:
SLJ85370
UniProt:
A0A1U6GPK4
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Position
I:complement(2568518..2571196)
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AA seq
892 aa
AA seq
DB search
MTKPTTKKSAAPAADKPKGSPKGKSLVIVESPAKAKTINKYLGDDFIVRSSIGHIRDLPV
GASKSAKKPTTTKKDDSLTKEEKTQQALVRRMGVDPEHNWAAVYEVLPNKTKVIKELKAL
AKDADKIYLATDMDREGEAIAWHLKEVIGGEDSKYERVVFNEITKSAIQNAFKQPSKLDI
DRVNAQQARRFLDRVVGFMVSPLLWQKVARGLSAGRVQSVAMRLVVEREHEIRAFIPEEY
WQIHADTHIADSKAKKVTDAEQIAIRLEATKQGGKTLKLVNKEQTDKVLEVLKASDFIVK
EREEKPTQSRPSAPFITSTLQQAASTRLGFSVKKTMILAQRLYEAGHITYMRTDSTFLSG
DALAAVRGYIEDSYGAKYVPEKPNFYGNKQGAQEAHEAIRPSNVNMKSTQLKAVERDAIR
LYELIWRQFVACQMLPAKYLSVNLFVGADDVELKARGRTLVFDGYTKVMPPAKTDDTLLP
DVKKGDKLTVDKLDPSQHFTKPPPRYTEASLVKELEKKGIGRPSTYASIISTIQDRGYVK
LENKRLFAEKMGDIVTDRLTASFPDLMDYTFTAALEDKLDHVAEGEQDWKDVLDDFYGEF
KTTLDRAKEKDGMRPNDPTDVPDVHCDLCDRPMQLRTGSTGVFLGCTGYNLPPKERCKGT
KNLMPVEAFANLDEAEGDDEAAEVRDLMEKKRCPKCSTAMNGYIVDGGLKLHVCGNNPDC
DGYILEEGKFEVPGSDSPTIDCNKCDGQMELKTGRFGPYFACQKCDNTRKVLKTGEAAPP
RMDPIHLPELKSVKHEDYFILREGAAGMFLAASKFPKVRETRPPKLAELREIKDKMEDKF
QYLFEGPDEDPDGNPTILRWSRKKKEQYIGSEKNGKATRWGVYWRNGKWVEE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacccacaactaaaaaaagcgcagcgcccgctgctgacaaacccaaaggcagc
ccaaaaggtaagtctttggtaattgtcgaatcacccgccaaagcaaaaaccattaataaa
taccttggtgatgactttatcgtgcgctcaagtatcggtcatatccgagatttacccgtt
ggcgcgagcaaaagcgcaaagaaaccgacgacgactaaaaaagatgacagtctgaccaaa
gaagaaaaaactcagcaagcattggtacggcgcatgggcgttgatcctgagcataattgg
gcagcagtttatgaagtactgccaaataaaaccaaggtcattaaagagcttaaagcctta
gccaaagacgctgacaaaatctatctcgcaacggatatggatagagaaggagaggcgatt
gcttggcatcttaaagaagttatcggcggcgaagatagtaaatacgagcgcgtggtcttt
aacgagattaccaaatctgccattcaaaatgcttttaaacaaccatctaaactcgatatc
gatcgcgttaatgcccagcaagcaaggcgctttttagaccgtgtggttggttttatggta
tcgccgctactgtggcaaaaagtggctcgcggcttgtctgccggtcgtgtgcaatccgtt
gccatgcgcttggtcgttgagcgtgagcatgaaatccgcgcctttattccagaagagtat
tggcagattcatgcagatacccatattgctgatagcaaagccaaaaaagtcacagacgct
gagcaaattgctattcgtttagaagccaccaaacaaggcggaaaaacgctaaagctcgtt
aataaagagcagaccgataaagtattagaggttcttaaagcaagcgactttatcgttaaa
gaacgcgaagagaaaccaacgcaatcacgcccaagcgcgccatttattacctcgacccta
caacaagcagccagtacacgattggggttttcggttaagaaaaccatgattttggcgcaa
cgtttgtacgaagcgggtcatattacttatatgcgtaccgattcgacctttttatctggt
gatgcgcttgctgctgtacgtggctacatcgaagacagctatggcgcaaaatatgtacca
gaaaagccgaatttctacggtaataaacaaggcgcacaagaggcgcatgaagccattcgt
ccgtctaatgtcaatatgaagtcaacccagcttaaagctgttgagcgtgatgcgatacgt
ttgtatgagctaatctggcgtcagtttgtggcttgtcagatgctaccagcaaaatatcta
tccgtaaatctgttcgttggcgctgatgatgtcgagctcaaagcgcgcggtcgtactttg
gtatttgatggctatactaaagttatgccaccagccaagaccgacgataccttattacct
gatgtcaaaaaaggcgataaattaaccgtagataagcttgatccgagtcaacactttacc
aagccgccaccacgttatactgaggccagcctagttaaagagcttgagaaaaaaggcatc
ggtcgtccatcgacgtatgcttctatcatctcgaccattcaagatcgcggttatgtgaag
cttgaaaacaaacgtttatttgctgaaaagatgggtgatatcgtcaccgacagactgaca
gcaagtttcccagacttgatggattatacctttactgctgcattagaggacaagcttgac
catgttgcagaaggcgagcaagattggaaagatgtgcttgatgacttctatggcgagttt
aaaactaccctcgatcgtgccaaagaaaaagacggcatgcgtccgaatgacccgaccgat
gtaccagacgtacattgcgatctttgtgatcgtccgatgcaactgcgtaccggttcaacg
ggtgttttcttaggttgtacaggctataacttaccaccgaaagagcgctgtaaaggcacc
aagaacttaatgccagtcgaagcttttgccaatcttgatgaggcggaaggcgatgatgaa
gcggcagaagtccgagatttgatggagaaaaagcgttgcccgaaatgtagtacggcaatg
aatggttatatcgtcgatggcggtcttaagctacatgtttgtggtaataatcctgattgt
gatggttatatcttagaagaaggtaagtttgaagtgcctggctctgattctccaaccatt
gactgtaataagtgcgatggacaaatggagcttaagaccggacgctttggtccttacttt
gcttgtcaaaaatgcgacaacacacgtaaagtgcttaaaacgggtgaggctgcgccacca
cgtatggaccccatccatctgccggagctaaaatcagttaagcatgaggattattttatc
ttacgtgaaggtgctgctggtatgttcttagcagcttctaagtttcctaaagtgcgggaa
acgcgtccgccaaagcttgctgagctacgcgaaatcaaagataagatggaagataaattc
cagtatctgtttgaaggaccagatgaagatccggatggtaatccgactattctgcgttgg
tcgcgtaagaaaaaagagcagtatattggctctgagaaaaatggtaaagccacacgttgg
ggtgtgtactggcgtaacggcaagtgggtagaggagtaa
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