Psychroflexus sp. ALD_RP9: IMZ30_00350
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Entry
IMZ30_00350 CDS
T09874
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyd03400
]
IMZ30_00350
Enzymes [BR:
psyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IMZ30_00350
DNA repair and recombination proteins [BR:
psyd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IMZ30_00350
Prokaryotic type
IMZ30_00350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
XRN1_D2_D3
UPF0184
Motif
Other DBs
NCBI-ProteinID:
QSS97204
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Position
70230..71714
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AA seq
494 aa
AA seq
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MKPEINIHWFKRDLRLQDNEALYKAVSAKKPTLCLYCFEDFIIQDQHYSERHFNFIKQSL
KELNTLLDNYQTRVLVVNGQIIELLEKIRQHYKITAVYSHIETGLNCTFQRDQKVLQYLK
NNNIIWKEYQNNGVKRGRKNRINWREDWEEYMNMPLVKFKAHPRQFLSHTAIGKLGLREA
NLNIKTSKYFQPGGRSYAKKYEDSFFNERILKYSSHISKPDLARISCSRLSPYIAWGNVS
VREIAQRLANIRLNQPKLKGKSIKRQLNAVASRLSWQSHFIQKFEQECRMEFEPINKAYV
DIFKVNQNYIKAWKSGETGYPLVDASMRCVKETGYINFRMRAILASFFCHHLFQGFWHGS
AFLAQQFLDFEPGIHYPQFNMQAGVTGINTIRVYNPVLNAQKHDPEAKFIKHWLPELKKL
PPVFAHEPWKMTPLDQSFANFTIGKDYPNPIIDINKTRQHALDKLYGLRKRQFSQKESQR
ILQTHTLPNRKPEN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagaaattaacattcattggtttaaacgtgacttgcgcttgcaagataatgag
gctttatacaaggcagtttcagcaaaaaaacctactttatgtttatattgctttgaagac
ttcataatacaagatcagcattatagtgagcgacattttaattttataaaacaatcttta
aaagaactcaacactttactcgataattatcaaacacgtgtgttggttgttaacggacaa
ataattgaactactagaaaaaattcgtcaacattataaaattacagcagtttattcacac
atagaaactggcttaaactgtacatttcaaagagatcaaaaggttcttcaatatttaaaa
aataacaatatcatatggaaggaatatcaaaataacggtgtcaagcgtggtcgaaaaaat
cggataaattggcgtgaagattgggaagaatacatgaatatgccacttgtaaaatttaag
gcacatccacgccaatttttatctcatactgctatcggaaaattgggcttaagagaagca
aaccttaatataaaaacttctaaatattttcaacctggcggaagaagctatgctaaaaaa
tatgaagattctttttttaatgaacgtattttaaaatatagctcgcatatcagtaaacca
gatttagcaaggatttcatgtagtcgcttatcgccttatattgcctggggaaatgttagt
gtcagagaaatagcacaaaggttggcaaatattagattaaatcaacctaaattaaaagga
aaatcgattaagcgtcaacttaatgcggtagcatcacgcctaagttggcaaagccatttc
atccaaaaatttgagcaagaatgccgaatggaatttgaacctatcaataaggcttacgtt
gatatatttaaagttaatcaaaactacatcaaggcatggaaatctggagaaaccggttat
cccttggtcgatgcaagtatgcggtgcgtaaaagaaactggctacataaattttagaatg
agagctattttagcctcttttttttgtcatcatttatttcaagggttttggcatggtagt
gcatttttagcacagcagtttttagactttgaacctggaattcattacccacaatttaat
atgcaagctggagttacaggaattaataccatacgtgtgtataatccagttttaaatgct
caaaaacatgatcctgaagctaaatttataaaacattggctacctgaattaaaaaaatta
ccgcctgtatttgcgcatgaaccctggaaaatgacgccacttgatcaaagttttgctaat
tttacaattggcaaagattatcctaaccccataattgacataaacaaaacgagacaacat
gcattagacaaactgtatggtttacgtaaaagacaattttctcaaaaagaaagtcaacgc
attttacaaacacatactttacctaatcgtaaacctgaaaattag
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