Psychroflexus sp. ALD_RP9: IMZ30_02890
Help
Entry
IMZ30_02890 CDS
T09874
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IMZ30_02890 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psyd01007
]
IMZ30_02890 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyd03016
]
IMZ30_02890 (alaS)
Enzymes [BR:
psyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
IMZ30_02890 (alaS)
Amino acid related enzymes [BR:
psyd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IMZ30_02890 (alaS)
Transfer RNA biogenesis [BR:
psyd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IMZ30_02890 (alaS)
Prokaryotic type
IMZ30_02890 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
NRBF2
DUF2203
Myc-LZ
MCM6_C
APG6_N
Motif
Other DBs
NCBI-ProteinID:
QSS97672
LinkDB
All DBs
Position
complement(619938..622544)
Genome browser
AA seq
868 aa
AA seq
DB search
MKSQQLRDKFLNFFTSKSHQIVPSAPIVLKDDPSLMFTNAGMNQFKEYFLGNSKPKSTKI
ADSQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSIGDYFKNEAISWAWEFLTEVLKID
KNSLYVTIFEGDKVDGIAKDTEAFEIWKQFVPDNRILLGNKKDNFWEMGDQGPCGPASEI
HVDIRTDAEKAKKPGHELVNQDHPQVVEIWNLVFIQFNRLANGKLVELPAKHIDTGMGFE
RLAMVMQGVQSNYDTDVFTPIISEIETISGFSYGKTEDVDIAIRVIADHVRAVAFAIADG
QLPSNNGAGYVIRRILRRAIRYGFTFLKMKEAFIYKLVDVLSKQMGKAFPEIIKQKQLCQ
NVIREEEHSFLRTLDQGLTLLDQIMQQSSTKIISGKKAFELYDTFGFPIDLTALILEEND
FKLNQNEFNAELEKQKSRSRKAAETSTEDWEVIREDDSEEFIGYDYLETSVKIVKYRKVT
SKKDGALFQLVFNLTPFYPEGGGQVGDKGYLESPSGDVTYIIDTKKENNLIIHITKSLPK
NINATFNAVVDANQRQRAAANHTATHLLHQALRHVLGDHVEQKGSMVHSGSLRFDFSHFS
KVSRDELVEVEAFVNARIQEQLNLVEKRNIPYDQAISEGAIALFGEKYGDTVRTIQFGQS
TELCGGTHVKNTSELWSFKITSESSVASGIRRIEAITADAVKSYLDDKAQKLAQIEALLN
QPKDVSKAIDKLLSESAQLQKENEQLKAEKAKYIKSELKSQIKPINGINSLIAQVDLDAG
SMKDLAFQFGGEFDDLVVILASKYNNKALLTCYISKSIVSEELNAGKIVRELGKFIQGGG
GGQAFFATAGGKKPEGIPDALEAAKTLL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccaacaattacgcgataaatttttaaacttttttacctcgaaatcacatcaa
attgttccatcagctcccattgttcttaaggatgatccaagcttaatgtttactaatgct
ggtatgaatcagtttaaagagtattttcttggtaattctaaaccaaaaagcactaaaatt
gccgattcacagaagtgtttacgagttagtggcaaacacaatgatttagaagaggtagga
aaagacacctaccaccatactatgtttgaaatgctcgggaattggagtattggcgattat
tttaaaaatgaagctatctcttgggcttgggaatttttaactgaagtgctaaaaattgat
aaaaacagtctttacgttacaatttttgaaggcgataaggttgatggcatagcaaaagat
actgaagccttcgaaatttggaaacaatttgttcctgataaccgaattttacttggcaat
aaaaaagataatttttgggaaatgggtgatcaaggtccttgtggcccagcttctgaaatt
catgttgatattagaaccgatgctgaaaaagccaaaaaacctggtcacgaattagttaat
caagatcatccacaagttgttgagatatggaatttggtattcattcagtttaaccgttta
gctaatggaaaattagttgagttacccgcaaaacatatcgatactggcatgggttttgaa
cgtttagcgatggtcatgcaaggtgtacaatctaattatgatacagatgtttttacacca
attatctctgaaattgaaacgatttcaggttttagttatggtaaaactgaagatgtagat
attgcaattcgtgtaatagccgatcatgtaagagcagttgcctttgctattgcagatggt
caattaccaagtaataatggcgcaggttatgtgattaggcgaattttacgtcgtgcgatt
aggtatggttttacatttttaaagatgaaagaagcctttatctacaaattagttgatgtg
ctaagtaagcaaatgggtaaagcatttcctgaaattataaagcaaaaacaactttgccaa
aatgtaattagagaagaagaacactcgtttttaaggacattagatcaaggcttaacattg
ttagaccaaatcatgcagcaaagttcaactaaaattatctcaggcaaaaaagcttttgaa
ttatacgatacttttggttttcctatcgatttaaccgcattgattttagaagaaaacgat
ttcaaattaaatcaaaatgaatttaatgcagaactcgaaaaacaaaaatcacgatctaga
aaagcggccgaaacttcaactgaggattgggaagttataagagaagatgattctgaagag
tttataggttacgactatttagaaacatcggttaaaatcgttaaataccgaaaagttact
tcaaaaaaagatggagcgctttttcaactagtctttaatttaacgcctttttatccagaa
ggcggtggccaagttggagataaaggttatttagagtcgccttcaggtgatgttacatac
atcatagacacaaaaaaagagaataatttaattattcacattactaagagtttacctaaa
aatatcaatgctacttttaatgcagttgtagatgctaatcagcgacaacgtgctgctgca
aaccatacagcaacccatttattgcatcaagctttgcgtcacgttttaggtgatcatgtt
gagcaaaaaggctctatggtgcattcgggaagtttaaggtttgatttttcgcatttttct
aaagtcagtcgtgacgagttagttgaagttgaagccttcgtcaacgctagaattcaggaa
caactcaacttagtagaaaaaagaaatataccttatgatcaggctataagtgaaggtgca
attgcattatttggcgaaaaatatggtgatacggtaagaaccatccaatttggacaatca
acggaattatgtggtgggactcacgttaaaaatacaagtgagttatggagttttaaaatt
actagtgaaagctcagtagcatccggaattagacgaattgaagccattacagcagatgct
gttaaatcttaccttgatgataaagctcaaaaattagctcagatagaagccttacttaat
cagcctaaagatgtttcaaaggctattgataagcttttaagcgaatctgcacaactacaa
aaagaaaacgagcaattaaaagcagaaaaagcaaaatatattaaaagtgaactaaaatct
caaattaaaccaattaacggtataaacagtttaatagctcaagttgatcttgatgctggt
tccatgaaagatttagcgtttcaatttggtggagagtttgatgacttagtagtaatctta
gcttcaaaatataataataaagccttgctgacttgctatatttctaaatctattgtttca
gaagaattaaatgcaggtaaaatagtccgtgaactaggtaagtttattcaaggtggcggt
ggcggacaggccttttttgcaaccgcaggcggtaaaaaaccagaaggaattcctgatgca
cttgaagcggctaaaacgctactgtaa
DBGET
integrated database retrieval system
