Psychroflexus sp. ALD_RP9: IMZ30_03115
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Entry
IMZ30_03115 CDS
T09874
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ30_03115 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyd03019
]
IMZ30_03115 (groL)
03110 Chaperones and folding catalysts [BR:
psyd03110
]
IMZ30_03115 (groL)
03029 Mitochondrial biogenesis [BR:
psyd03029
]
IMZ30_03115 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyd04147
]
IMZ30_03115 (groL)
Enzymes [BR:
psyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IMZ30_03115 (groL)
Messenger RNA biogenesis [BR:
psyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IMZ30_03115 (groL)
Chaperones and folding catalysts [BR:
psyd03110
]
Heat shock proteins
HSP60 / Chaperonin
IMZ30_03115 (groL)
Mitochondrial biogenesis [BR:
psyd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IMZ30_03115 (groL)
Exosome [BR:
psyd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IMZ30_03115 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IMZ30_03115 (groL)
Exosomal proteins of breast cancer cells
IMZ30_03115 (groL)
Exosomal proteins of colorectal cancer cells
IMZ30_03115 (groL)
Exosomal proteins of bladder cancer cells
IMZ30_03115 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QSS97715
LinkDB
All DBs
Position
668625..670259
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIIFDIEARNGVKRGVDALANAVKVTLGPKGRNVIIGKSFGAPSVTKDGVSVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVASGANPLDLKRGID
KAVEAVVAELTKQAKSVGDTSEEIKQVASISANNDDKIGELIAEAFGKVGKEGVITVEEA
KGTETYVDVVEGMQFDRGYLSPYFVTDSEKMTTDLESPHILIVDKKINAMKELLPVLEPA
AQSGKPLLIIAEDIEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENATLDMLGTAENVTIDKDNTTIVNGAGEKENIVNRVNQIKAQVESTTSDY
DKEKLQERLAKLSGGVGVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVSGGGVALI
RTLKALEGLKVENADEQTGINIIAKAIEAPMRTIVENAGGEGSVVINKVLEGTKGYDAKT
NTYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALVDIKEDDNNAGGGMPPMGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataatttttgatatagaagcaagaaatggtgttaaaagaggagttgat
gctctagcaaacgctgttaaagtaacattaggcccaaaaggtagaaatgtaattattggt
aaatcatttggcgcaccttcagttacaaaagatggtgtaagtgttgctaaagaaattgag
cttgaagatgcattagaaaacatgggagctcaaatggttaaggaagttgcttctaaaact
aatgatctagctggtgatggtacaacaactgcaaccgtattagctcaagcaattgtaaaa
gaaggtttaaaaaacgttgcttcaggtgcaaaccctttagatttaaaaagaggaatcgat
aaagctgtagaagcagttgttgcagaattaaccaaacaagctaaatctgttggtgatact
tcagaagaaattaaacaagtagcatcaatttctgctaataatgatgacaagataggcgaa
ctaatcgctgaagctttcggtaaagttggtaaggaaggcgttattacagttgaagaagct
aaaggaacagaaacttatgttgatgttgtagaaggtatgcaattcgacagaggttattta
tcaccttactttgtgactgatagtgaaaaaatgacaacagatcttgaaagtccacacatt
ttaattgttgacaagaaaatcaacgcaatgaaagagttgcttccagtattagaaccagca
gctcaaagtggtaaacctttattgattattgcagaagatattgaaggtgaagcacttgct
acattagtcgtaaataaattaagaggatcgttaaaaattgctgctgtaaaagcaccaggt
ttcggtgaccgaagaaaagcaatgttagaagatattgcgatcttaacaggtggaactgta
atatctgaagaacgcggatttactttagagaatgctactttagatatgttgggtactgca
gaaaatgttacaatagataaagataacacaactattgtaaatggtgccggagaaaaagag
aacattgttaatcgtgtgaaccagattaaagcccaagtagaatctacgacaagtgactac
gataaagaaaaattacaagagcgtttagccaaactttcaggtggtgttggtgtactttat
gtcggtgcagcttcagaagtggagatgaaagagaaaaaagatagagttgatgatgcatta
catgcaacacgtgcagctgtagaagaaggcattgtttctggtggtggtgttgcattaatt
agaactttaaaagcattagaaggtcttaaagttgaaaatgcagacgaacaaacaggaatc
aatattattgcaaaagcaattgaggcaccaatgagaacaattgtagaaaacgctggtggt
gaaggttctgttgttatcaacaaagttttagaaggaacaaaaggctatgatgcaaaaacc
aacacttatgtagacatgcttaaagcaggtattatagatcctaaaaaagttacacgcgta
gccttagagaatgcagcttcggtttcaggtatgattttaactactgaatgtgcacttgtt
gatattaaagaagatgataacaatgccggtggtggaatgcctccaatgggtggcggaatg
ccaggtatgatgtaa
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