Psychroflexus sp. ALD_RP9: IMZ30_03760
Help
Entry
IMZ30_03760 CDS
T09874
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd03030
DNA replication
psyd03430
Mismatch repair
psyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMZ30_03760 (dnaE)
03430 Mismatch repair
IMZ30_03760 (dnaE)
03440 Homologous recombination
IMZ30_03760 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyd03032
]
IMZ30_03760 (dnaE)
03400 DNA repair and recombination proteins [BR:
psyd03400
]
IMZ30_03760 (dnaE)
Enzymes [BR:
psyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMZ30_03760 (dnaE)
DNA replication proteins [BR:
psyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMZ30_03760 (dnaE)
DNA repair and recombination proteins [BR:
psyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMZ30_03760 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
P63C
DUF2683
Motif
Other DBs
NCBI-ProteinID:
QSS97837
LinkDB
All DBs
Position
complement(784645..788994)
Genome browser
AA seq
1449 aa
AA seq
DB search
MYIIFDTETTGLPKRWDAPISDVENWPRAIQIAWQVHDQWGELIEAEDYLIQPEGFDIPY
DAERIHGISTALAKTEGEELNLVLERFNEALAKAKFVVGQNVGFDVNIMGAEFFRAQLET
PLLNMSVLDTCTEKTAKLCQIPGGRGGKYKLPTLTELHEHLFNQPFEEAHNATADVEATT
RCFLELIRIHNYTEEELKVQPGYLDEFKAKHSSPIQPIGLKHVNLKQASDKLKARETSTE
TQPTKEEIQQNLAELEANHFVHLHNHSQFSVLQSTSSVADLVAAAAKHRMPAVALTDHAN
MMGAFHFVNAIKKHNKSITEDSDLVPLKPIIGCEFFVCEDHTDKSRKDNGYQIVLLAKNK
NGYHNLAKLSSIGFTKGFYYVPRIDKTLIEQYKEDIIALTGNMYGEVPSKILNLGEKQAE
EALIWWKETFKDDFYIELMRHQQEDEDRANNTLIAMANKHNVKLLATNNTYYINQQDANA
HDILLCVKDGEKQSTPIGRGRGYRYGLPNNEYYFKSADEMKSLFKDLPEAITNTEEIADK
VEAYDLARDVLLPAFTIPEEFQDAKDLSDNGKRGENAYLKHLTYEGAKERYGELSESIKE
RLDFELSVIANTGYPGYFLIVEDFIREARKMGVSVGPGRGSAAGSAVAYCLKITNIDPIK
YDLLFERFLNPERVSMPDIDIDFDDEGRSKVMQYVIDKYGENQVAQIITYGTMAAKSAIR
DTARALDLPLYEADRIAKLVPDMSKLSKIFGKTDKELKEKFRAEDLVKVQELLGISEQDS
PEADTVNQARILEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDLYVTQFDNSVVEDA
GLLKMDFLGLKTLTLIKDTVEIVKARHGVELDPESFPLDDQKTYELFQRGETVGIFQYES
PGMQKHMKDLKPTVFEDLIAMNALYRPGPMEYIPSFIKRKHGGEEISYDLPDMQEYLEET
YGITVYQEQVMLLSQKLANFTKGEADVLRKAMGKKLKDVLAKLKPKFINQAKDNGHPEEK
LEKIWKDWEAFASYAFNKSHSTCYAFVAYQTAYLKAHYPAEYMAAVLSNNMNDIKKVTFF
MEECRRMGLDVLGPDVNESYYKFSVNKNNAIRFGMGAVKGVGGGAVDTIVKHRKKDGNYK
SIFDLAKRIDLRAANKKAFESLALAGAFDSLGEVHRAQYFHQTESDLNFLEKVLKYASKF
QENQNSAQVSLFGEASEVQIPEPEVPPCDPWHTMKTLKAEKEVIGLFLSGHPLDDFKLEI
KHFCNTDIRCFNSIENYLNKELLFAGVVTDVQHRVSKNGKGFATFILEDYYESHEFWIFG
EDYLKFRHFLVLDNFVHVKTTARQFINKETGEPGRTRITFKAFKQLQDVVKEFATKLTLT
LDIKELNDDFVKQLEQVISQHKGSKHVKFKIRDHQDKIELQMPSKTKKVEISKELLLSLQ
DFNLSYKLN
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcatttttgataccgaaactacaggtcttccaaagcgttgggatgcacctatt
agcgatgttgaaaattggccaagagccatacaaattgcctggcaagttcatgatcaatgg
ggtgaattaattgaagcagaagattatttaattcaacctgaaggttttgatattccttat
gatgcagagcgtattcatggtatttctacagcactagcaaaaactgaaggagaagaactt
aatttagtattagagcgttttaatgaagcccttgcaaaggcaaaatttgtagtcgggcaa
aatgtcggttttgatgtaaatatcatgggagctgagttttttagagctcaacttgaaaca
ccattgctcaatatgtccgttttggacacttgtactgaaaaaacagcaaaattatgtcaa
attcctggaggtcgtggaggaaaatataagctaccaactttaacagaattacacgaacat
ctatttaatcaaccatttgaagaagctcacaacgctaccgccgatgtagaagcaacaact
cggtgttttttagagttaattagaattcataactacactgaagaagagttaaaagttcag
cctggttatttagacgaatttaaggcaaaacattcttctccaattcaaccaataggttta
aagcatgttaatttaaaacaagcttctgataaattaaaagctagagaaacttcaactgaa
acacaacctacaaaagaagaaattcaacaaaacttagcagaactagaagctaatcatttt
gttcatcttcataatcacagccaattttcagtgttacaatctaccagttctgtagcagat
ttagttgctgctgctgcaaaacatcgcatgccagctgttgccttaacagatcatgccaat
atgatgggtgcatttcattttgtaaatgccattaaaaagcataataaatctatcactgaa
gatagtgaccttgtaccgcttaaacctattatcggatgcgaattttttgtttgtgaagat
cacaccgataaatctcgaaaagataatggctatcaaattgtcttactagcaaaaaataaa
aacggttatcataatcttgcaaaattatcttctattggttttacaaaaggcttttattat
gtgccaagaatagataagactttaattgagcaatataaggaagacattatcgccctaaca
ggaaatatgtatggtgaagtaccaagtaaaattttaaatcttggtgaaaaacaagctgaa
gaagccttaatatggtggaaagagacttttaaagatgatttttatatcgagctgatgcgt
catcaacaagaagatgaagatcgtgccaataacactttaattgcaatggctaataagcat
aatgtaaagttgttggcgactaataatacttattatatcaatcagcaagacgccaacgca
cacgatattttactttgtgtaaaagatggagaaaagcaatctacacctatcggtcgtggt
cgaggttaccgttatgggttacctaataatgaatactattttaagtcggctgatgaaatg
aaatctttatttaaggatttgccagaagccattactaatacagaagaaatagccgataaa
gttgaagcttatgatcttgctagagacgttttgctaccagcatttactataccagaagag
tttcaagatgctaaagatctatctgataatggtaaacgtggcgaaaacgcttaccttaag
catttaacctatgaaggtgctaaagaacgttacggagaattatcagaatctattaaagag
cgtttagattttgaactttcggtaatcgctaatacaggatatccaggatactttttaatt
gttgaagattttattcgtgaagcaagaaaaatgggagtttcagttgggccaggacgaggt
tcagcagcaggtagtgcagtagcctactgcttaaaaatcaccaacatagatccaattaaa
tatgatttactgtttgagcgttttttgaatcctgaacgtgtaagtatgcctgatattgat
attgattttgatgatgaaggtcgaagcaaagttatgcagtatgtgattgataaatatggc
gaaaatcaggtggcacaaattataacttatggtacaatggcagctaaatctgctattcgc
gatacagctcgagcactagatttaccactatacgaagccgatcgcatagcgaagttagta
cccgacatgtctaagttgagtaaaatttttggtaaaactgataaagaacttaaagaaaaa
tttagagctgaagaccttgtaaaagtgcaagaacttttaggtatatcagagcaagattcg
ccagaagccgataccgtgaatcaagcaagaatattagagggctcagttagaaatacaggt
attcatgcatgtggcgtaattattacacctgatgatatcacaaagtttgttcctgtttct
ttagcaaaagattcagacttatacgtgacgcaattcgataattcagttgttgaagatgct
ggtttacttaaaatggacttcttaggtctcaaaaccttgactttaattaaagatacagtt
gaaattgtaaaagcacgtcatggtgtagaactcgatcctgaatcttttccattagatgat
caaaaaacttacgaactttttcaacgaggagaaactgtagggatttttcagtatgaatca
cctggcatgcaaaaacatatgaaagatcttaagccaacagtttttgaagatctaatcgct
atgaatgccttgtacagacctggaccgatggaatatattcctagttttattaagcgtaaa
catggtggtgaagagatttcgtatgatttacctgacatgcaagaatatcttgaagaaacc
tacggaattactgtttatcaagagcaagtgatgttactttctcaaaagctagctaacttt
actaaaggtgaagctgatgttttgcgtaaagctatgggtaaaaagttaaaggatgtacta
gctaaattgaaaccaaaatttattaaccaagctaaagataatggccatcctgaagaaaag
ttagagaaaatatggaaagattgggaagcatttgcaagttacgctttcaataaatcgcac
tcaacttgttacgcatttgtagcttatcaaacggcttaccttaaagcacattatccagcc
gaatatatggctgctgttttatctaacaacatgaatgatattaaaaaagttacctttttt
atggaagaatgtcggcgaatgggactagatgtattaggtccggatgtaaacgaatcttat
tacaagttttcagttaataaaaataatgccattcgatttggaatgggtgctgtaaaaggt
gttggtggtggagctgttgatacaattgtaaaacatagaaaaaaagatggtaattacaaa
tctatttttgatcttgctaaacgcatagatttacgcgctgctaataaaaaggcttttgag
agtttagctttagccggtgctttcgatagcttgggtgaagttcatagggcacagtatttt
catcaaacagaaagcgatcttaactttttggagaaagtgctcaagtatgcttctaaattt
caagaaaatcaaaattctgctcaagtaagtttatttggagaggctagtgaagttcaaatt
cctgaacctgaagtgccgccttgtgatccttggcacactatgaaaacgcttaaagctgaa
aaagaagttattggtttatttttgtctggtcatccgcttgatgattttaaacttgaaata
aaacatttttgtaatacggatattagatgttttaattctattgaaaactaccttaataag
gaattactctttgctggtgtagtcacagatgttcaacatcgtgtgagtaaaaatggtaaa
ggttttgcaacttttattttagaagactattatgaaagccatgagttttggatttttggt
gaagactatttaaagtttagacattttttagtgttagataattttgttcatgttaaaaca
acggcaagacaatttatcaacaaagagactggtgagccaggtcgaacacgtattaccttt
aaagcatttaaacagctacaagatgtcgttaaagagtttgcaactaaacttacgctaact
ttagatataaaagaattaaatgatgatttcgtaaaacagctagaacaagtaattagccag
cacaaaggctcgaagcatgtgaaatttaaaattagagatcatcaagataaaattgaatta
caaatgccaagcaaaactaaaaaagtagaaatttctaaagaattactcctgtcacttcaa
gattttaatttaagttacaaactcaactaa
DBGET
integrated database retrieval system
