Psychroflexus sp. ALD_RP9: IMZ30_05315
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Entry
IMZ30_05315 CDS
T09874
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd03030
DNA replication
psyd03430
Mismatch repair
psyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMZ30_05315
03430 Mismatch repair
IMZ30_05315
03440 Homologous recombination
IMZ30_05315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyd03032
]
IMZ30_05315
03400 DNA repair and recombination proteins [BR:
psyd03400
]
IMZ30_05315
Enzymes [BR:
psyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMZ30_05315
DNA replication proteins [BR:
psyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMZ30_05315
DNA repair and recombination proteins [BR:
psyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMZ30_05315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Mad3_BUB1_I
Motif
Other DBs
NCBI-ProteinID:
QSS98135
LinkDB
All DBs
Position
complement(1119177..1120295)
Genome browser
AA seq
372 aa
AA seq
DB search
MNYNDVLGLEHLKNHLKTTVENQRVAHAQLFIGEHGYGVLPLALAFAEHLVSSSSAKTYT
SILEHPDVHFVYPVNVTESSSKKPTSQEFLEDWRSFIRKSPYQNLFDWYQHIGIEKKQGL
IKVTQAQEILKTLSLKSFSGGVKVMIIWCADLMNRETSNKLLKLIEEPPKDTFFILTTSN
ADQIIDTIKSRCQLLNFPPLSESVIADALISRSIDSQIAKSIAHQADGDFVRALHLAYHN
EDELQFEDWFISWVRSAFRAKGNKSVVDDLINWSEAIAKENRELQKRFLEYCLQFFRQAL
LKNYNANDLVFLQPNDRKFKFDAFSTFITGANIKPIFEAISQAIYHIERNGNAKMIFTDL
SFQLTRFLHKKN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaattataatgatgtacttgggcttgagcaccttaaaaatcacttaaaaaccactgtc
gaaaatcagcgtgttgctcatgcccaactatttattggtgagcatggttatggtgttttg
ccacttgctttagcatttgctgagcatttagtgagttcatcaagcgcaaagacttatact
tctattcttgaacatcccgatgtgcattttgtttatcctgtgaatgttacagagagttca
agtaaaaaacccacaagtcaagaatttcttgaagattggcgaagttttattagaaaatca
ccttatcaaaatttatttgattggtatcagcatattggtattgaaaaaaaacaaggcttg
attaaagttactcaagctcaagaaattttaaagactttaagtttgaaatcattttcaggt
ggtgtaaaagtgatgatcatttggtgtgcagatttaatgaatcgtgaaacttcaaacaaa
ttactgaagttaattgaagagccaccaaaagatactttttttatacttacaacttcaaac
gctgatcaaattattgatacgattaaatcgcgttgtcaattgctcaattttcctccacta
agtgaatctgttatcgctgatgctctgattagccgttctattgactctcaaatagctaag
tctattgcacatcaagctgatggagattttgttagagctttacaccttgcttatcataat
gaagacgaattacaatttgaagattggtttatatcttgggttcgttctgcctttagagct
aaaggaaataaatctgttgtagatgatttaattaattggtctgaagcgattgcgaaagag
aatagagaattacaaaagcgttttttagagtattgtttacaattttttagacaagcatta
ttgaagaattataatgcaaacgacttagtttttcttcagccaaatgatagaaaatttaag
tttgacgccttttctacgttcatcacaggtgccaatataaaacctatttttgaagcgatt
tctcaggctatttatcatattgaacgaaacggcaatgctaagatgattttcacagattta
tcgtttcaacttactagatttttacataaaaaaaactag
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