Psychroflexus sp. ALD_RP9: IMZ30_05940
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Entry
IMZ30_05940 CDS
T09874
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IMZ30_05940 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psyd01007
]
IMZ30_05940 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyd03016
]
IMZ30_05940 (serS)
Enzymes [BR:
psyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IMZ30_05940 (serS)
Amino acid related enzymes [BR:
psyd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IMZ30_05940 (serS)
Transfer RNA biogenesis [BR:
psyd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IMZ30_05940 (serS)
Prokaryotic type
IMZ30_05940 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
LUC7
DUF4776
TMF_TATA_bd
APG6_N
FapA
Motif
Other DBs
NCBI-ProteinID:
QSS98258
LinkDB
All DBs
Position
complement(1254368..1255639)
Genome browser
AA seq
423 aa
AA seq
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MLDVKQISTHKDAFIKALKKRNFNAEAIFDKLLKLDEDRKQTQKQLDDTLAESNQLSKEI
GALYKQGKTDEANTIKEKTGSLKESSKQLNHKMENILSELKDLLYIIPNVPHELVPAGQT
EDDNQEIYSKGDIPKLSHKALPHWELAKKYDLIDFELGNKITGAGFPVFKGKGAKLQRAL
ITYFLDKNTDAGYQEVQVPLLVNEASGYGTGQLPDKEGQMYHVTGDNLYLIPTAEVPITN
IFRGDMVNESELPIQLTGYTACFRREAGSYGAHVRGLNRLHQFDKVELVNLTTPEQSYQM
LDNMVEHVKDILDELKLPYRILRLCGGDLGFTSALTYDFEVFSTAQDRWLEISSVSNFET
FQANRLKIRYKSANQKKQLVHTLNGSSLALPRVIAGILENYQTDEGIKIPEVLVPYTGFE
WIK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtaaaacaaattagtacacataaagacgcttttataaaagcattaaaaaaa
agaaattttaatgccgaagctatttttgacaagcttttaaaactagatgaagaccgcaaa
caaactcaaaaacaattagacgacacattagcagaatctaaccaactatctaaagaaatt
ggggcattatacaagcaaggaaaaacagatgaagctaatacaattaaagaaaaaacaggg
tctttaaaagaaagttctaaacagctaaaccacaaaatggaaaatattttgtctgagcta
aaagacttactttacatcatacctaacgtgcctcatgagttagtacctgcagggcaaact
gaagatgacaatcaagaaatttacagcaaaggcgatattccaaaactaagccataaagct
ttacctcattgggagttagccaaaaaatatgatttaattgattttgagttaggcaataaa
attacaggtgcaggatttccagtatttaaaggaaaaggcgctaaattacagcgtgcactt
atcacttattttctagataaaaatacagatgcgggctatcaagaagtacaagtaccactt
ttagtgaatgaagcttcaggttatggcaccggacaattacctgataaagaaggccaaatg
tatcatgttactggtgacaatttatacctcatcccaacagctgaagtacctataactaac
atatttagaggagacatggttaatgaaagtgaattgccaattcaattaaccggctacact
gcttgctttagacgtgaagcaggtagttatggcgctcacgttcgcggactaaaccgttta
caccaatttgataaagttgaattagtaaatcttaccacacctgaacaatcttaccaaatg
ttagataacatggtagagcacgtcaaagatattttagacgagttgaagctaccttacaga
atattacgactttgtggtggtgatttaggatttacatcagcattaacatacgattttgaa
gtattttctacggcacaagaccgttggttagaaatctcatctgtatctaattttgaaacc
tttcaagccaaccgactaaaaatacgttataaatcggccaatcaaaaaaagcaacttgta
catactttaaacggtagttcattagcgctaccaagagttatagctggcattttagaaaat
taccaaaccgatgaaggaataaaaatacctgaagtattagtaccttatacaggttttgag
tggattaagtag
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