Psychroflexus sp. ALD_RP9: IMZ30_05985
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Entry
IMZ30_05985 CDS
T09874
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
psyd
Psychroflexus sp. ALD_RP9
Pathway
psyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMZ30_05985 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyd03400
]
IMZ30_05985 (recO)
DNA repair and recombination proteins [BR:
psyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IMZ30_05985 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IMZ30_05985 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
LisH_TPL
Motif
Other DBs
NCBI-ProteinID:
QSS98267
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All DBs
Position
1275400..1276116
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AA seq
238 aa
AA seq
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MQIKTTGLVLSTVKYSEADLIVSIFTKEKGLVSFFLKGIRKAKRSKLKSSQFQLLSCLAL
DFTYRDNKSMQFIKEAKTHISLQNLQQNIYKSTMCMFLAEVLKLSIQEEEQNIALYQFLE
NSLQSLDQASTYADFHLQFLVELTRFLGFYPEINHNDYAYFNLLEGAFQSEELSKYVISG
SNVQILEQCLNSSDLFSSLRIHQKKRQDFLDMLLYYYEIHLDGFRIPKSKAILEQVFA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaaaccacaggtcttgttttatcgacggttaagtatagcgaagccgattta
atcgtgagcatattcaccaaagaaaaaggtttggttagtttttttttaaaaggaattcgg
aaggctaaacgctccaagctgaaatcatctcaatttcagcttttatcttgtttagcactc
gattttacctatcgcgataacaagtcgatgcaatttattaaagaagctaaaactcacatt
tcgcttcaaaaccttcaacagaatatttataaatcgaccatgtgtatgtttttggctgaa
gtattgaagttgagcatacaagaagaagaacagaatatcgctttatatcagtttttagaa
aatagtcttcaaagtttagatcaagccagcacttacgctgactttcatttgcaattttta
gtagaattaacacgattcttaggcttttaccctgaaataaatcataatgattatgcatac
ttcaacctattagaaggtgcatttcaatctgaagaattgtctaaatatgtgattagtggt
agcaatgttcagattttagaacagtgtttaaattcttcagatttgtttagttcgcttcgg
attcatcaaaaaaagcgtcaagactttttagatatgctcttgtattattacgaaattcat
ttagatgggtttcgtattcctaaatcgaaagctattctagaacaagtctttgcttaa
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