Psychroflexus sp. ALD_RP9: IMZ30_06270
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Entry
IMZ30_06270 CDS
T09874
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyd03016
]
IMZ30_06270 (truB)
Enzymes [BR:
psyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMZ30_06270 (truB)
Transfer RNA biogenesis [BR:
psyd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMZ30_06270 (truB)
Prokaryotic type
IMZ30_06270 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5513
Motif
Other DBs
NCBI-ProteinID:
QSS96069
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All DBs
Position
complement(1334033..1334746)
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AA seq
237 aa
AA seq
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MPKLDLKDYKEGQVLFFDKPLNWTSFQLVNKIRWLIKREFKIKKIKVGHAGTLDPLATGL
VIICTGKKTKTIQDLMGQTKVYTGEITFGATTASYDLETEINQYFETQHITEQLLHETTS
KFTGKIMQQPPIFSALKKEGKRLYEFAREGKSVEIPKREVYIEEFKLTSIQGLGDQQPKA
TFKVVCSKGTYIRSLAHDFGKSLNSGGHLSALRRTAIGSYTVENALTIEDFEQQLSS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaactagatttaaaggattacaaagaaggtcaggttttattttttgataagcct
ttaaactggacgtcatttcaacttgttaataaaataagatggctaattaaacgtgaattt
aagattaagaaaataaaagttggtcatgcaggaactttagatccgctcgcaaccggattg
gtaattatctgtacagggaaaaaaaccaaaaccattcaagatttaatggggcaaactaaa
gtatacacaggtgaaattacatttggagccacaacagcatcttacgatttagagactgaa
attaaccagtattttgaaacacagcatattactgaacagcttttacacgaaacaacttca
aaatttacaggtaaaatcatgcaacaaccgcctatattttcagccttaaaaaaagaaggt
aagcgactttatgagtttgcacgagaaggaaaatctgtcgagataccaaaacgagaggtt
tatattgaagaatttaagctgacgtcaatacaaggcttaggtgaccaacaacccaaagca
acttttaaagtggtttgcagtaaaggcacttatattagaagtttagcgcatgattttggt
aaatcacttaactctggcggccatttaagcgctttaagacgaacagctattggcagctat
actgtcgaaaatgcactaactattgaagactttgaacaacaattaagtagttga
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