Psychroflexus sp. ALD_RP9: IMZ30_11630
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Entry
IMZ30_11630 CDS
T09874
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyd03016
]
IMZ30_11630
Enzymes [BR:
psyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IMZ30_11630
Transfer RNA biogenesis [BR:
psyd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMZ30_11630
Prokaryotic type
IMZ30_11630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QSS97076
LinkDB
All DBs
Position
complement(2478357..2479139)
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AA seq
260 aa
AA seq
DB search
MMQQRYYYLVKIQYLGFRYHGWQKQPDVKTVELMLNKTLNYILEGKRFKCIAAGRTDAMV
SANQTYIELFLYDEPLQLDGFLNLFNYNLPQDIRVLDISETSKDFNIIQHAKLKTYHYYF
CYAQKMHPFSAPFMLNVRDDLDIDLMISGAQLFTQMTDFYSFTFRPSKLTKFEGEIESCL
IENNNVLKANFFPEQSYVLKVKGKGFKRQQIRLMMGALIDLGQHNITLDYFKQLIDGKNR
IKLSHVAPASGLVLHKVELV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgatgcagcaaagatattactacctagttaagattcaataccttggattcagataccat
ggctggcaaaaacaaccagatgtaaaaaccgtagaacttatgcttaataaaacgcttaat
tatatcttagaaggtaagcgttttaaatgtattgctgctggcagaacagacgctatggta
tctgcaaatcaaacatacatcgagttatttttatatgatgaaccacttcaacttgatgga
tttttaaatctgttcaattacaatttaccacaagatatcagagttttagacatttctgaa
acttctaaagatttcaatattattcaacatgcgaagttaaaaacctatcattactatttc
tgttatgcacaaaaaatgcatccattttcagcgccttttatgttaaatgttcgtgatgat
ttagatatagacttaatgatttctggagctcaattattcacacaaatgacggatttttat
tcatttaccttccgaccaagcaaattaacaaaatttgaaggcgaaatagaatcatgttta
attgaaaataataatgtactaaaggctaacttttttccagagcaatcttatgttcttaag
gtaaaaggcaaaggttttaaacgtcagcaaatcaggttaatgatgggtgcacttatcgat
ttaggacaacataacattacattagattattttaaacaattaattgacggtaaaaaccgt
ataaaattaagtcatgttgctcctgcttcaggtcttgtattacataaagtagagcttgtt
taa
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