Desulfovibrio mangrovi: N1030_01955
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Entry
N1030_01955 CDS
T08614
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf00260
Glycine, serine and threonine metabolism
psyf00460
Cyanoamino acid metabolism
psyf00630
Glyoxylate and dicarboxylate metabolism
psyf00670
One carbon pool by folate
psyf00680
Methane metabolism
psyf01100
Metabolic pathways
psyf01110
Biosynthesis of secondary metabolites
psyf01120
Microbial metabolism in diverse environments
psyf01200
Carbon metabolism
psyf01230
Biosynthesis of amino acids
psyf01240
Biosynthesis of cofactors
psyf04981
Folate transport and metabolism
Module
psyf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N1030_01955
09102 Energy metabolism
00680 Methane metabolism
N1030_01955
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N1030_01955
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N1030_01955
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N1030_01955
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N1030_01955
Enzymes [BR:
psyf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N1030_01955
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UZP67758
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All DBs
Position
complement(419365..420603)
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AA seq
412 aa
AA seq
DB search
MDELFLQDPEVARAMYQEIERQTGGLELIASENFVSSAVRQTQGSVMTHKYAEGYPGKRY
YGGCEFVDVAEDLAINRARTIFGAEYANVQPHSGSQANMAAYFAIAKPGDTILGMDLSHG
GHLTHGSPVNFSGRFFNIVFYGVEKETGRIDYDQVEKLAKEHKPTVIVAGASAYPRELDF
VRFRAIADEVGAKLMVDMAHIAGLVAAGVHSSPIPYAHITTTTTHKTLRGPRGGMILSSE
DMGKCLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPEFKEYQKQVVENAQTLAKCLTAQG
FELVSGGTDNHLMLVDLTNKDITGKAAQLALDEAGITVNKNTVPFETRSPFVTSGIRIGT
PALTTRGMQGKDMEKVADWIIDALGNIENETRLKAIRKEVEAFARQFPIFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgttcttgcaagaccctgaagtagcacgggcaatgtatcaggaaatcgag
cgccagaccggcgggctcgaacttatcgcatccgagaacttcgtctcttccgcagtgcgc
cagacgcaaggcagcgtaatgacgcacaagtacgccgaaggatacccgggcaagcggtac
tacggcggatgtgagtttgtagacgtggcggaagacctggccatcaaccgcgccagaaca
atcttcggggccgaatacgccaacgtgcagccccactccggcagccaggccaacatggcg
gcatactttgccatcgccaagcccggcgacaccattctgggcatggatctttcccacggt
ggtcacctgacccacggcagccccgtgaacttctccggtcgtttcttcaacatcgtcttc
tacggcgttgaaaaggaaaccggccgcatcgactacgatcaggtcgagaagctcgccaag
gaacacaagcccaccgtcatcgtggccggcgcaagcgcctacccccgcgaactggatttc
gtccgcttccgcgccattgccgatgaagttggcgccaagctgatggtggacatggcccac
atcgccggtctcgtggccgcgggtgtgcacagctctcccattccctacgcgcacatcacc
accacgaccacccacaagacccttcgcggtccccgcggcggcatgatcctcagctccgag
gatatgggcaagtgcctgaacagccagatattccccggcattcagggcggtccgctcatg
cacgtcatcgcggccaaggccgtggccttcggcgaagcgctgcgccccgagttcaaggaa
taccagaagcaggtagtcgaaaacgcccagacgctggccaagtgcctcaccgcacagggc
tttgaactcgtttccggcggtacggacaaccacctcatgctggttgacctgaccaacaag
gacattaccggcaaggccgcgcagctggcgctggacgaagcaggcatcaccgtgaacaag
aacaccgtgccctttgaaacccgcagccccttcgtaacctccggcatccgcatcggcacc
cccgccctgaccacccgtggcatgcagggcaaggacatggaaaaggtcgccgactggatc
atcgacgcactcggcaacatcgagaacgaaacgcgcctgaaggccatccgcaaggaagtg
gaagccttcgcccgccagttcccgatcttcgcctggtaa
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