Desulfovibrio mangrovi: N1030_02590
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Entry
N1030_02590 CDS
T08614
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N1030_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyf03000
]
N1030_02590
Transcription factors [BR:
psyf03000
]
Prokaryotic type
Helix-turn-helix
Other families
N1030_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_16
GAF_2
AAA_22
AAA_5
AAA_7
NACHT
AAA
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UZP67882
LinkDB
All DBs
Position
555984..557528
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AA seq
514 aa
AA seq
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MHEISPLKLKVLSELGGIVGRALRLERALYEVLSVLGSHLSMKHGTISLLNRERTAVVSC
VSHNHSMRDQSKGMCRLPDSEIVKTALKGQPFVVMEGNAAPVTLDGAVARRLVRQKVAML
GVPVMEHGREAGLVAVDRLFESPVSIDADMEFLSMIAAFVGQLVCLNNAVAERMDELKRE
NVALRYRVSGETRKGYVVARSASMSEVECQMEQVAASDEPVLIVGEAGVGKAMLAALIHD
ISERSRHPFVRVDCQAVWQSQGNAAWGKSPLAGGDAFAVHFAERVEASHGGTLCVEHMEF
LPPAVQALLLRVLQGQELERAGCNLVRRVDVRVIALSDSDIVQDVRMGRVSPELYGMLAG
SQIHVPPLRERKEDLSALLNHLIAKVDREYGRHLSFGADALEVLQRYDWPGNVSEVEMVV
ERLASMTDGERIGAASLMSLLGGEGAGTGRKGGATGAASLKDMERKEVLSALRRTGWVQY
RAAEELGLTPRQMGYRIRKFGLENMVASERARVR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaatctcccccctcaaactaaaggtgttgtcagaacttggcggcatagtcggc
agggctctcaggcttgagcgcgccttgtacgaagtgctttctgttctggggagccacctt
tccatgaagcatggaaccatttcattgctgaatcgggaacgtacggcagtggtcagctgt
gtgtcgcataaccattccatgcgtgatcagagcaaagggatgtgtcgtctgcctgattcg
gagatcgtgaaaacggctctgaaggggcagccgttcgtggttatggagggtaatgctgcg
ccggtgacacttgatggggctgtagccagaagacttgtgcgccagaaggtggccatgctc
ggtgttcccgtcatggagcatggccgggaggctggtctcgtggctgtggaccgactgttt
gagtctccggtctccattgatgcggatatggagtttctttccatgatagccgcgtttgtc
gggcagctcgtctgtctcaataacgcggttgcggagaggatggatgagttgaagcgggag
aacgtggccttgcggtatcgcgtatccggcgaaacccgaaagggatacgtggtggcccgc
agtgcgtccatgtccgaggtggagtgccagatggaacaggtcgctgcttcggacgagcca
gtgctgatcgtcggtgaggccggagtcggtaaggctatgctggccgcccttattcatgat
atttccgagcgttcccgccatccgttcgtccgtgtcgattgtcaggctgtgtggcagtct
caggggaatgcggcgtggggcaaaagtcctttggctggtggtgatgccttcgccgtccac
tttgctgagcgggttgaggcgtcgcatggtggaacattgtgcgttgaacatatggaattt
cttcctcctgcagtgcaggccctgttgctcagggtgttgcaggggcaggagcttgagcgc
gcgggctgcaatctggtgcgccgtgtggatgtgcgtgtcattgcgttgagcgattcggat
attgtgcaggatgtcagaatgggccgcgtcagtcctgagctctacgggatgcttgccggc
agccagatacacgttcccccgttgcgcgagcgtaaggaggatttgtcggcactgctgaat
cacctgattgcgaaggtggatcgcgagtacgggcggcacttgagctttggtgcggatgcg
ttggaagtgctgcagcgatatgattggcccggcaacgtcagcgaggttgagatggtcgtt
gagcgtctggcttccatgactgacggcgagcgtatcggtgcggcgagcctgatgtcgctg
cttggcggcgaaggtgcaggcaccggaagaaagggtggggcgactggagccgcttcgctg
aaagatatggagcgcaaggaagtgctgagcgcgctgcgccggacgggctgggttcagtac
agggcggcggaagagcttggactcaccccgcgccagatgggatatcgcatcagaaagttc
gggttggagaatatggtggcttccgagcgggcgcgtgttcgttga
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