Desulfovibrio mangrovi: N1030_03160
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Entry
N1030_03160 CDS
T08614
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psyf
Desulfovibrio mangrovi
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyf03009
]
N1030_03160
Ribosome biogenesis [BR:
psyf03009
]
Prokaryotic type
ribosomal protein modification factors
N1030_03160
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Ortholog
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Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_8
TPR_9
TPR_12
TPR_16
Iml2-TPR_39
CFAP70_TPR_C
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
UZP67993
LinkDB
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Position
complement(680494..682224)
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AA seq
576 aa
AA seq
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MIRLSSCPKHYTADQDKVMTPGETVARVKARLAELETQILAETRRIDTGRLDIPVFLSVC
GADARKFMPTRKQMGKGASVEQAEASALMELMERYSYWTFWERKPDMVRCTWTEAATRFG
DKLIGMDVILQSVSESLPHDKAARVMDLTEWWFCPATDVHTGEERIIPLDWFRKLGEFNG
SSAGNTDEESIFQGACELVERHVCCVIDRAGKPVPTISPASFTDPVLVNLYSKFTDNGIV
VILKDFSQGMPVPTVAAIAWDPATFPYQSEIVYTAGTASSPVKAAVRALTEVAQLAGDFE
SGACYEASGLPKYARTEELGWLLDGPQVNLDELPTVENGDIYEELMALVRGLQTQGYSLF
SIQTTNPELNVSANYNIVPGFQFRERDKNASLGLFVGRILSEECDAPTAARGLSALEDIY
PNAHFLPFFKGMLALRAEAFDEACTFFEQAEPLQPEADAQGLAAFYSGYCHTLKEDWQAA
LSGLDRAVALCPEMKEYFNFRGVTRFKLGMYAEAADDFRTLIKDLDKGSAIDLANLGLCC
KFLDQRAEAEEYLTAALDIDPSIEFARTHLNELRGE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatacgactttcaagttgccccaagcactacaccgccgatcaggacaaggtcatgact
cccggagagaccgtggcccgcgtgaaagcccgcctcgccgaactggaaacacagattctg
gcggaaacccgccgtatcgacacgggtcgccttgatatccccgtctttctttccgtatgc
ggtgcggacgcccgcaagttcatgcccacccgcaagcagatgggcaaaggcgcttccgtg
gagcaggccgaagcctctgccctgatggagctgatggagcgctacagctactggaccttc
tgggaacgcaaaccagacatggtacgctgcacctggacggaagcggcaacgcgctttggc
gacaaactgatcggcatggacgttattctgcagtccgtctccgaatcgctgcctcatgat
aaagccgcccgcgtgatggatctgaccgaatggtggttctgtcccgccacggacgttcac
accggcgaagagcgcatcattccgctggactggttccgcaagctgggcgaattcaacggc
tcatccgcgggcaacaccgatgaggaatccatctttcagggagcctgcgaactggtggaa
cgccatgtctgctgcgtcatagaccgcgcaggcaagcccgtgcccaccatcagccccgct
tccttcaccgatccggtgctggtgaatctctacagcaagttcacggataacggcattgtc
gtcatcctcaaggacttctcgcagggcatgcccgtccccacagtcgctgccattgcatgg
gacccggccaccttcccctaccagtcggagatcgtctataccgccggcacagcctcctcc
cccgtcaaggccgccgtacgagccctgacagaagtagcccagcttgcaggcgactttgaa
tccggagcctgctacgaagcctccggcctgcccaagtacgcacgcacggaggaactgggc
tggctgctggatggcccgcaggtcaatcttgatgaactgcccacggtggaaaacggcgac
atctacgaagaactcatggcgctcgttcgcggtctgcagacgcaaggctacagcctcttc
tccattcagaccaccaatccggaactgaacgtttccgccaactacaacatcgttcccggc
ttccagttccgcgaacgcgacaagaacgccagcctcggcctctttgtgggccgcattctc
agcgaagaatgcgacgctcccacggcagcacgaggactgtctgcgctggaagacatctat
cccaacgcccacttcctgcccttcttcaagggcatgctcgccctgcgcgcagaagccttt
gacgaggcctgcaccttcttcgaacaggccgaaccgctgcagcccgaagccgatgcgcag
gggctggccgccttctacagcggctattgccatacgctgaaagaagactggcaagcagcc
ctgtccggtctggaccgcgccgtggcgctgtgccccgaaatgaaggaatacttcaacttc
cgcggcgtcacacgcttcaaactgggcatgtacgccgaagccgcggacgacttccgcacg
ctcatcaaggatctggacaagggctcggccatcgaccttgccaacctcgggctgtgctgc
aagttccttgaccagcgtgccgaggccgaggaatacctgacggccgcactggacatcgat
ccatccatcgaattcgcccgtacgcatctgaacgaactgcgcggagaatag
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