Desulfovibrio mangrovi: N1030_03515
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Entry
N1030_03515 CDS
T08614
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N1030_03515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyf03000
]
N1030_03515
Transcription factors [BR:
psyf03000
]
Prokaryotic type
Helix-turn-helix
Other families
N1030_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_3
Parvo_NS1
AAA_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UZP68058
LinkDB
All DBs
Position
766329..767909
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AA seq
526 aa
AA seq
DB search
MSVTNLQDESLQPYLGTLQRIVSEMGPQRPFQSTLKSLLKTLAENHDFQRPHLVIFDPET
RTLKLSLAHTPTKAAHVEYEPGVGVTGQVFSSGQPVIVPRMKDHPAFLNRAFGRTEEELM
SLAFICVPVLGPGEDDEGREVIGTLSVDTPTSDMSKLLGQSKFLAVVAGMIANQAAYLQE
EMARQKHLMSQGLIAGDNVETGFIPPNIVAASKSMRLVLNQAAQVGPSRATALLRGESGT
GKELLAEAIHQASPRREQPLIKLNCAALPSELVESELFGYQKGAFTGAVQDKKGLFELAN
KGTLFLDEVGELSPTAQAKVLRAIQEQEIQRLGSEKTITVDVRLICATHQPLEELVEKGH
FREDLYYRINVFPVFIPPLRERREDILPLAEHFLSLYAEEYTRDIKRISTPAIDLLTQYH
WPGNIRELKNCIERAVLVCDEHVIRTYHLPPSLQTAESTATDSNLSFCEAVAKFEQELLV
DALKKARGNMLQAARDLRVSYRIVNYKVKKYGLDAKKFAVAKGRPR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaccaacctacaagacgagagtctacagccgtatctgggaacgcttcagcgc
atcgtgtctgagatgggaccccagcgtcccttccagtccacgctgaagtctctgctcaag
acactggcggagaatcatgacttccagcggcctcatctggtcatcttcgaccccgagacc
cgcacgctcaagctcagccttgcgcatacgccgacaaaggcggcgcatgtggaatatgag
cccggcgtcggtgtgacggggcaggtgttctccagcgggcagcctgtcatcgtgcctcgc
atgaaggatcatccagccttcctcaaccgcgctttcgggcgtaccgaggaagaactgatg
agtcttgccttcatctgcgtgccggtgctcggccccggtgaagatgatgaagggcgcgaa
gtcatcggcaccctcagcgtggatacgcccacgagcgatatgtccaagctgctgggacag
tcgaagttccttgccgttgttgcgggcatgattgccaaccaggctgcatacttgcaggag
gaaatggcacggcagaagcacctgatgtcgcaggggctcattgccggagacaatgtggag
acgggattcatcccccccaacattgtcgccgcttccaaatccatgcgtcttgtattgaat
caggctgctcaggtcggtcccagccgtgccaccgcgctgctgcgcggcgaatccggtacg
ggtaaggagctgctggcggaagccatccatcaggccagcccccgccgcgagcaacccctg
atcaagcttaactgcgccgcgcttccttccgaactggtggagagcgaactcttcggttac
cagaagggtgcttttaccggtgcggtgcaggacaagaaaggccttttcgaactggcgaac
aagggtaccttgttccttgatgaggtgggcgaactcagccccacggcgcaggccaaggtg
ctgcgcgccattcaggagcaggagattcagcgcctcggcagcgaaaagaccattaccgtt
gatgtgcgtcttatctgtgccacgcatcagcctctggaagagctggtggaaaaggggcac
ttccgtgaagacctctattaccgcatcaacgtgttccccgtattcattccgccgctgcgc
gagcgtcgggaagacattctgcctctggcggaacacttcctcagtctgtatgcggaagaa
tacactcgtgacatcaagcgtatctccacgcccgcgattgacctgctcacgcagtatcac
tggcccgggaacatacgtgaactgaagaactgcattgagcgtgcggtgctggtgtgtgac
gagcacgttatccgtacctaccatctgccgccttcgctgcagacggcggaaagtaccgca
accgattccaacctttcgttctgcgaagccgtggccaagttcgaacaggagctgctggtg
gacgcgctcaagaaggcccgcggcaatatgctgcaggcagcgcgcgatctgcgggtgagc
taccgtatcgtgaactacaaggtgaagaaatacggtttggacgccaagaaattcgccgtg
gcgaaggggcgtccgcgttaa
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