KEGG   Desulfovibrio mangrovi: N1030_04550
Entry
N1030_04550       CDS       T08614                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
psyf  Desulfovibrio mangrovi
Brite
KEGG Orthology (KO) [BR:psyf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psyf03019]
    N1030_04550 (rapZ)
Messenger RNA biogenesis [BR:psyf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     N1030_04550 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 AAA_21 AAA_18 AAA_22 ABC_tran
Other DBs
NCBI-ProteinID: UZP68255
LinkDB
Position
993861..994748
AA seq 295 aa
MDSTSPSFPVLVVTGLSGGGKSTVLKVFEDLRYYTIDGLPVSLAMQLVSILDERSLAKYR
GLVLGMDLRHFEFDSGFHAILQAMRDKGVAPAIIFMEARPDVIVRRYKETRRPHPLESGG
LGLEQAMETERKLLEPVRAMADLVIDTSDYSIHDIRRVIQQKWTIIEGNRRSMRVHLLTF
GFKYGTPAEADMVFDLRFLPNPHHEPDLRPLSGKDPVISKYVLGSGVGKEYLERLTEFLH
FTLTQMESEGRYRATVAIGCTGGRHRSVAAAEALFEALKNFDFAVSIEHRHMELV
NT seq 888 nt   +upstreamnt  +downstreamnt
atggactctacttctccgtcatttcccgtccttgtcgtcaccgggttgtccggtggcggc
aagagtaccgttctcaaggtcttcgaggatctgcgttactatacgattgacggactcccc
gtatccctcgccatgcagttggtctccattcttgatgaacggagtctggccaagtatcgt
ggtctggtgctgggaatggacctgcgccatttcgagttcgacagcggttttcatgccatt
ctgcaggcaatgcgggacaagggggtggctcctgcgatcatattcatggaagcacggccc
gacgtaatagtccgtcgttacaaggaaacacgtcgtccgcatcctcttgagagcggcgga
ctgggccttgaacaagccatggagactgaacgtaagctgcttgagccggtccgcgccatg
gccgatcttgtaatcgatacttccgattattccattcatgatataaggcgggtcatccag
cagaaatggaccattatcgagggcaacaggcgcagcatgcgcgtgcatttgttgaccttc
ggcttcaagtacggcacacctgccgaggccgatatggtgttcgacctgcgttttctgcct
aaccctcatcatgaaccggatcttcggcccctttccggaaaagaccccgtcatatcaaag
tatgtgctcggttccggcgtggggaaggaatatctggagcgtctgacagaattcctgcac
ttcacgttgacgcagatggagtctgaagggcgttaccgcgccacagtcgccattggctgc
acggggggcaggcaccggtcggtcgccgcagctgaagccctttttgaggctttgaaaaac
tttgattttgctgtatccattgagcaccggcatatggagctggtctag

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