Desulfovibrio mangrovi: N1030_04585
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Entry
N1030_04585 CDS
T08614
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf00020
Citrate cycle (TCA cycle)
psyf00620
Pyruvate metabolism
psyf00720
Other carbon fixation pathways
psyf01100
Metabolic pathways
psyf01120
Microbial metabolism in diverse environments
psyf01200
Carbon metabolism
psyf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N1030_04585
00620 Pyruvate metabolism
N1030_04585
09102 Energy metabolism
00720 Other carbon fixation pathways
N1030_04585
Enzymes [BR:
psyf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
N1030_04585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_C
Biotin_carb_N
Dala_Dala_lig_C
ATP-grasp
HMGL-like
Biotin_lipoyl
ATP-grasp_3
GARS_A
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
UZP68261
LinkDB
All DBs
Position
999746..1003459
Genome browser
AA seq
1237 aa
AA seq
DB search
MAKKTFHQVLDEVKGKPILVANRGIPARRICRSIRERFDGIAIMTATDVDKTSPAASAAQ
ELLLLGKDPRGYLDIDRIIDLAKKRGVVAIHPGWGFASEDDTFPKRCAEEGIIFIGSSAE
AMNLLGNKVQVRRIAKKIGVPVVPGSEGAVDVPLARELAEEIGFPIMLKAEGGGGGRGIF
LVQNQEELESAFIKASTMAQASFGNPRVYVEKYLASVRHIEIQVIADKYGNVFAFDERDC
TVQRNHQKLVEITPSPSPLITPELRAQLKDYSRKLVLEVGYDSLATVEFLVTAEGVPYLI
EVNTRLQVEHGITECRYGIDLVEEQIAVAFGAELRLTEENCPPAQWAIQLRINCEDPQAN
FSPNCGVVSRYVSPGGPGIRIDSNLSAGYEFPSNYDSAGALLIAYGRGWNKALGTIERAL
NEYAIGGVKTTIPFFKQVIKHPKFRDASYDTNFIAKTPELLCYTDVAPEALRLSRLIAGI
SAKGFNQHVLLGDYRTPDTPRVGNGKFEPVLPAIPAKQLKAEPPYPRGDRKALLDYVRDS
DFVHFCDTTPRDITQSNSGNRFRLAEDMMIAPYLDNCGFFSIENGGGAHFHVAMMANMTY
PFTEAEQWNRVAPKTLKQILIRSTNVLGYKPQPRNLMRLTGEMICDHYHVIRCFDFLNHV
DNMRPFAEVAMSRKEVVFEPAISLSWAKGFDVEHYLGVTAAILKMVSDVAGVGENKASEM
IILGLKDMAGVCPPRFISALVAALRKRWPKLVLHCHRHYTDGLFVPSVGAAAKAGAHIVD
TGIGAAVRWYGQGEVLSTAAYLEDELGLKTNLNKDMIRECNFALKQIMPYYDRYTAPYFQ
GIDHDVVEHGMPGGATSSSQEGAMKQGYIHLLPYMLKFLAGTRKIVRYHDVTPGSQITWN
TAFLAVSSAYKRGGENEVKYLLSVLDEVNKMDACQDCQAELAEARLALYQDSNDAFRDLL
LGKFGKLPLGFPPDWVYQSAFGDDWKQAIAKRTEQSPLEILSDMDLVAEEKSFIEHIKRK
PTDEEFVMYLNHPGDALKTVQFRNEFGNPNQVPLDVWFEGLETGRELQFVDSNKKPHTMT
ILHKTTPDKSGKSVVRYVLDSEMLSYDVQVALPQEEEGIGYEKADKNNKNHVAAPSNGDL
WVMYVHPGDLVKKGEELFNISIMKQEKAVLAPVDGMVVRVVKTADFKENKVMVPVKEGEL
LVELGPVPRRCANEECQRPLTTEGGGFCPFCGVKLEA
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagacgtttcatcaggttttggacgaagtgaagggcaagccaattctggtt
gccaaccgcggtattcccgcacgccgcatctgtcgttccattcgtgagcggttcgatgga
atcgccatcatgactgcgactgacgtcgataaaacgtctccggccgcctctgccgcacag
gagcttctgctcctcggcaaagatcccagaggatatctggacatcgaccggataatcgac
cttgcgaagaagcgtggcgtggtcgccatccaccccggttggggctttgcttccgaagac
gacacgttccccaaacgttgtgccgaagaaggcatcatcttcatcggttcttccgctgag
gcaatgaatctgcttggcaacaaggtgcaggtgcgccgcattgccaagaagattggcgtg
cccgttgtgcccggttccgaaggtgccgtggacgttccgcttgcccgtgaacttgccgag
gagatcggcttccccatcatgctgaaagcagagggtggcggcggtggtcgcggtattttc
cttgtacagaatcaggaagagctggaatctgccttcatcaaggcttccaccatggcacag
gcctccttcggcaacccccgcgtgtatgtcgaaaagtaccttgcctctgtccggcatatt
gaaattcaggtcatcgcggacaaatacggcaacgtattcgcctttgacgagcgcgattgc
accgtgcagcgtaaccaccagaaattggtggaaatcacgccttctccctctccgctcatt
acgccggaactgcgcgcccagcttaaggactactcccgcaagctggtgcttgaagtaggc
tacgattctctggcgaccgttgagttcctcgttaccgcagaaggtgttccttatcttatt
gaagtaaacacccgtctgcaggtggaacacggcatcacggaatgccgctacggcatcgac
ctggtggaagagcagatcgccgttgcctttggtgccgaattgcgtcttaccgaggaaaac
tgcccgcccgcacagtgggccattcagttgcgcatcaactgcgaagacccgcaggccaac
ttctcgcccaactgtggtgtggtttcccgttacgtttcgcccggcggccccggcatccgt
atcgactccaacctctctgcaggctacgaattcccctccaactacgactcggcaggggct
ctgctcattgcctacggccgtggctggaacaaggcgctgggaaccattgaacgagcgttg
aacgagtacgccatcggcggcgtgaagaccacgatcccgttcttcaagcaggtcatcaag
catcccaagttccgcgatgcatcctatgacaccaacttcatcgccaagactcccgagctg
ctttgttacaccgatgtggctccggaagccctgcgtctttcccgtctcattgcaggcatc
agtgccaagggattcaatcagcacgttctgctgggtgattatcgcacgccggatactccc
cgtgttggcaacggcaagtttgaacctgttctgcccgccatccccgccaagcagctcaag
gctgaacctccgtatccccggggggaccgcaaggctctgctggattacgtgcgcgattcc
gacttcgtgcatttctgcgacaccaccccgcgtgacattacgcagtccaactccggcaac
cgtttccgtcttgcagaagacatgatgattgctccgtatctggataactgtgggttcttc
tccattgaaaacggtggcggtgctcatttccacgtggccatgatggccaacatgacctat
cccttcaccgaagcggagcagtggaaccgcgttgctcccaagacgttgaagcagattctc
atccgctccaccaacgtgctggggtacaagccgcagccgcgcaatctcatgcgcctgacc
ggcgaaatgatttgcgaccactaccatgttatccgctgtttcgatttcctgaaccacgtg
gacaatatgcgtccgtttgcggaagtggccatgagcagaaaggaagtggtctttgaaccc
gccatttccctttcctgggccaagggctttgatgttgagcactaccttggcgtcaccgca
gccatcctgaagatggtgagcgatgttgccggtgtgggcgaaaacaaggccagcgagatg
atcattctcggcctcaaggatatggccggggtctgcccgcccagattcatctccgcactc
gtagcagcgctgcgcaagagatggcccaagctggtactgcattgccacagacactacacc
gacggtctgttcgtgccttccgtaggtgcagcggccaaggcaggcgcacacatcgtggat
accggcatcggcgcagcagtgcgctggtacggtcagggcgaagtgctttccactgccgcc
taccttgaggatgaactcggtctcaagaccaatctcaataaggacatgatccgcgagtgc
aacttcgcgctcaagcagatcatgccgtactacgatcgctataccgcgccgtacttccaa
ggtattgaccatgacgttgtagaacacggcatgcccggcggtgccacttcgtcctcgcag
gaaggagccatgaagcaggggtatattcacctgctgccgtacatgctcaagttccttgca
ggtacccgcaagatcgtgcgttaccatgacgtgacccccgggtctcagatcacgtggaat
acggcgttcctcgcggtgtccagcgcctacaagcgcggcggcgaaaacgaagtgaagtac
cttctcagcgtacttgatgaagtgaacaagatggatgcctgtcaggattgccaggcagaa
ctggctgaagcgcgtcttgccctttatcaggacagcaatgacgccttccgtgatctgctg
ctcggcaagttcggcaagctgcccctcggattccctccggattgggtataccagagcgcc
ttcggcgacgactggaagcaggccattgccaagcgtaccgaacagtctccgctggaaatt
ctttccgacatggatcttgttgccgaagagaagagcttcatcgaacacatcaagcgcaag
cccactgatgaagagttcgtcatgtatctcaatcatcccggtgacgcgctcaagaccgtt
cagttccgtaacgaattcggtaaccccaatcaggtgccgctggacgtatggttcgaaggt
cttgaaaccggccgcgagttgcagtttgtagatagcaacaagaagccgcataccatgacc
attctgcacaaaaccactccggacaagtccggcaagagtgttgtgcgatatgtgctcgat
tccgaaatgctcagctacgacgttcaggtcgcgctgccgcaagaggaagaaggcatcgga
tatgaaaaggccgacaagaacaacaagaaccatgttgccgctccttccaacggcgacctc
tgggtcatgtacgttcaccccggcgatttggtgaaaaagggcgaagagctcttcaatatc
tccatcatgaagcaggaaaaggccgttctggctcctgttgacggcatggtggttcgtgta
gtcaagaccgcagacttcaaggaaaacaaggtcatggttcccgtcaaggaaggggagctg
cttgttgaacttggccctgtgccccgccgatgtgcaaacgaggagtgccaacgtcctctt
accactgaaggcggcggcttctgccccttctgcggcgtgaaactggaagcgtaa
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