Desulfovibrio mangrovi: N1030_05580
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Entry
N1030_05580 CDS
T08614
Name
(GenBank) SNF2 family helicase
Organism
psyf
Desulfovibrio mangrovi
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
UZP68446
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Position
1217352..1220555
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AA seq
1067 aa
AA seq
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MDEASARRLLNTLVEDTIPEYIIDGSRYILESGGVQKISLKKSEGYWDIEGTVQGEDFQI
YSPKLSVDFEEDSVNYMCNCPEAFSGACRHVGAAAIKFLATLDTKPGEDAEPQKPKTDWR
QNFRAFFATDIEPEAGRHYLIYRFHPEPGRLQVSFFRARQNKSGLSTVHNEVTLEQIIEN
PDWCELSPKLPIVAQQIGRYNDYFGHRVEIPDGLLTWFLWTVRREYYLFWKDTDSPCRVE
IGTMDLKLKPQLTEEGLTFDVMIRSEGKPPQSIVDNEVTFHGQIPLWVCWNKGFYPVYTS
LSSTLVQDLALQPPVVEKEDIPEFLDRVWTQLPATDLYGQEEFLKHMEPIFIPATYNPKL
FLDEEGSLLTLEIQNLYETVHGEFLLPGPNPSFMTGSYSFEGSTYLIRRMQEEEANLTDL
LLSMNFQPRSNRIWFLEPEEAITFLLDAYPKLVEQYRVYGEKALSKYKVRLATPAITATV
ESNEEEKWFSLEIEVEYDGQRVPIDTIWKAWVQGKRYVQLKDGSYTSLPESWLEKIAHKL
RAMGLDAEKPPKDRFEQFEAPALDNLLEDLPDVHTDPFWNSLREKIHSFKEIRQIGTPDG
LNATLRGYQAQGLSYLNFLREYGFGGILADEMGLGKTIQTLSFIQYMVEKGADGPNLIVV
PTSVLPNWDREAEKFVPSLRRLIIYGTRRENMFKQIEESNLVITTYALLRRDLEELQNYE
FNSIILDEAQNIKNPNTITARSVRKIQAKQRLCLSGTPIENNLFELWSLFEFLMPGFLGS
QHSFQRGIIKPIKDGDADTLDYLRNRVKPFILRRTKSEVAKDLPPKIENIQYCALADEQA
DLYAALATKLRQQVLNDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPS
GKFDAFKDMITEVVEEGHKVLVFSQFVSMLHIIRSWLQIADMPFAYLDGTSKDRFEQVDR
FNNSKDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVEDQATDRAHRIGQTSQVFSY
KMICSNTVEEKILKLQEMKKGVADAIIPGQDSWKSLTRSDLEMLFEV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcatcagcgagacggctgcttaacacactcgtggaagacacaatccccgaa
tacatcatcgatggttcgcggtacattctcgaatcaggaggcgttcagaaaatcagcctc
aagaaaagcgaggggtactgggatatcgaaggtaccgttcagggagaggacttccaaatc
tattcgcctaaactcagtgtcgacttcgaagaagactccgtcaattacatgtgtaattgt
ccggaagctttttccggagcctgccgtcacgttggggctgcagccatcaaatttcttgcg
accctggataccaaacccggtgaagatgccgagccgcagaagcccaaaacggactggcgc
cagaatttccgtgccttctttgccacggacatagaacctgaggccggtcgtcattatctt
atctaccgcttccatcccgaaccgggacgtttgcaggtttccttcttccgtgctcgccag
aacaagtccggtctttccaccgtacacaacgaagtgacgcttgaacagatcatcgagaat
ccggactggtgcgaactttcccccaagcttcccattgttgcacagcagatcggccgttac
aacgactacttcggtcatcgtgtggaaattccggatggcctgctcacgtggttcctctgg
accgtgcgccgcgaatactaccttttctggaaggacaccgactcgccctgccgggtggaa
atcggcaccatggacctgaagctcaagccgcagctcacggaagaaggcctgaccttcgac
gtgatgatccgcagcgaaggcaagccgccgcagtccattgtggacaacgaagtgaccttc
cacggccagattcctctatgggtgtgctggaacaagggcttctaccctgtttataccagc
ctgagctcaacactggtgcaggaccttgccctgcagccccctgttgtggagaaggaagac
attcctgaattccttgaccgggtctggacgcagttgccagccaccgacctgtacggacag
gaagagttcctcaaacacatggaacccattttcattcctgccacgtacaaccccaagctc
ttccttgatgaagaaggctcgttgctcacgctggaaatccagaacctgtatgagaccgtg
cacggcgaattcctgctgcccggccccaaccccagcttcatgaccggcagctattcattt
gaaggcagcacctacctcatccgacgcatgcaggaagaggaagcaaacctgaccgaccta
ctgctttccatgaatttccagcccagaagcaaccggatatggttccttgaaccggaagaa
gccatcaccttcctgctggatgcctatcccaagcttgtggagcagtatcgcgtttacggc
gaaaaagccctgtccaaatacaaggtgcgtcttgccacgcccgctatcaccgccacggtg
gaatccaacgaggaagaaaagtggttctcgctggaaatcgaggtggaatacgacggacaa
cgcgttcccatcgacaccatctggaaggcatgggtgcagggcaagcgctacgtacagctc
aaggacggctcctacaccagcctgcccgagtcatggctggaaaagatcgcccacaagctg
cgcgccatgggacttgatgccgaaaagccgccgaaggaccgtttcgagcaattcgaagct
cccgcactggacaacctgctggaagatctgcccgacgtgcatacggaccccttctggaac
agcctgcgcgagaaaattcattccttcaaggaaatcagacagatcggcacaccagatggt
ctgaacgccaccttgcgtggctatcaggcgcaggggctcagctatctcaacttcctgcgc
gaatatggcttcggcggtattcttgcggacgaaatgggtcttggtaagaccattcagacc
ctctcgttcatccagtacatggtggaaaaaggtgccgacggccccaaccttatcgtcgtg
cccacctccgttctgcccaactgggaccgcgaagcggaaaagttcgttcccagcctgcgt
cgcctgatcatctacggcacccgccgcgagaacatgttcaagcagatcgaggaatcgaac
ctcgtcatcacgacgtacgccctgctccgccgcgaccttgaagaactgcagaattacgag
ttcaactccatcattctggacgaagcacagaacatcaagaacccgaacacgatcacggcg
cgttccgtgcgcaagattcaggcaaagcaacgcctgtgtctctccggtacgcccattgag
aacaacctctttgaactctggtcgctcttcgagttcctcatgcccggtttcctcggttcg
cagcattccttccagcgcggcatcatcaagcccatcaaggatggcgatgcagacacgctc
gattacctgcgcaaccgcgtcaagccgttcattctgcgccgtaccaagtctgaagtggcc
aaggacctgccgcccaagatcgaaaacatccagtactgcgcccttgcggacgaacaggcc
gacctgtacgccgctctggccaccaagctgcgccagcaggttctgaacgacgtggacgag
aagggtatggccaagagccagatgtccattctggacgccctgctcaagctgcgccagatc
tgctgccacccgcgcctgctcaaactggatatgcccggcttctccacgaacctgccttcc
ggcaagttcgacgccttcaaggacatgatcacggaagtggtggaagaaggccacaaagtg
ctggtgttctcgcagttcgtatccatgctgcacatcatccgctcgtggctgcagattgcg
gacatgcccttcgcctatcttgatggtacctcaaaggaccgtttcgaacaggtggaccgc
ttcaacaacagtaaggacattcccatcttcctgatctctctcaaggcaggcggcaccggt
ctgaacctgaccagcgccgactacgtcatccactacgatccgtggtggaacccggccgtg
gaagatcaggcaaccgaccgcgcgcaccgcatcggccagacatctcaggtgttctcatac
aagatgatctgctccaatacggtggaagaaaagatcctcaagctgcaggaaatgaaaaag
ggcgttgcagacgccatcattcccgggcaggattcctggaagtctctcacccgctccgac
ctcgaaatgctctttgaagtctag
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