Desulfovibrio mangrovi: N1030_07725
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Entry
N1030_07725 CDS
T08614
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N1030_07725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyf03400
]
N1030_07725
Enzymes [BR:
psyf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N1030_07725
DNA repair and recombination proteins [BR:
psyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N1030_07725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
PIF1
HHH
Viral_helicase1
NAT10_TcmA_helicase
HHH_2
DEAD
nSTAND3
DNA_pol_lambd_f
MeaB
AAA_22
UvrD-helicase
TrwB_AAD_bind
AAA_28
NPHP3_N
AAA_16
PhoH
AAA
SLFN-g3_helicase
AAA_29
ATPase_2
HHH_3
ABC_tran
TsaE
NTPase_1
RsgA_GTPase
NB-ARC
Mg_chelatase
CbiA
Zeta_toxin
ResIII
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UZP68852
LinkDB
All DBs
Position
complement(1660347..1662557)
Genome browser
AA seq
736 aa
AA seq
DB search
MQQKSLLDASGEAEDQTAPVALKGSLERVVFHNEENGYTVFSLKTSTGDSVAVVGHMADP
QPGVSLEIWGDWVNNPRFGRQLHMQRHQTVLPAHVEGIRHYLGSGLIHGVGPKTAERIVA
AFGEKTFHVLDHEPERLLEVEGIGKKTAEAVQEGWSEHRGIRDLIMFLQPHGVSTAYAVR
IYRFYGKHALTVVQENPYRLAMDIHGIGFLTADAVARKLGFEKDSPLRAEAGTLYTLKKI
TEEGHVYYPLEKLVAKTAAELDIQYDLIEDAIHALKREERVVLEPLEGDDEAVYLTRFHA
YEAGISTYLRRLLGSPKSVEIPRSDEVVDKVVGDLGIKLAEAQLEAVRTAARAKVMVLTG
GPGTGKTTITNAIIKVFRSLKARVLLCAPTGRAAKRMFETSGEEAKTIHRLLEYSPREDG
FQRNEDNPLACGLLVVDEASMMDTMLMFHLLKAVPLGATVIFVGDVHQLPSVGPGNVLRD
VISSGVVDVVELTEVFRQAQESDIITNAHKINCGEVPYLEASKDQLTDFYFIRQDEPDRC
AAMIVDLVKNHIPRRFGMDRFNDIQVLTPMHKGSAGAGNLNLLLQQALNPRGELLKRGER
EFRLDDKVMQIRNNYDKDVFNGDIGRVCVVNPKEKEITVRFDDEKNVIYAFNELDELVPA
YAISIHKSQGSEYPAVVIPVLTQHYVLLQRNLIYTGVTRGKKLVILVGAPKALTMAVKNN
KMQKRYTRLAQRLAAR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaaatccttactcgatgcctccggagaggctgaggaccagaccgcgccggtg
gccttgaaaggctcgctggagcgggtggtctttcataacgaggagaacggctacaccgtt
ttcagcctcaagacttccacgggcgacagtgtggccgttgtggggcacatggccgatccg
caacccggcgtttctctcgaaatctggggcgactgggtcaataatccccgtttcggcagg
cagctgcacatgcaacggcaccagaccgtgctgcctgcacatgtggagggcatccggcat
tatctgggatccggcctcattcacggagtggggcccaagacggcggaacgcattgttgcg
gcgtttggtgaaaagaccttccatgtgctggatcatgagcctgagcgcctgctggaggtg
gagggcatcggcaagaaaacggccgaagccgtgcaggaggggtggagcgagcatcgcggc
atccgcgatctgatcatgttcctgcagccgcacggggtgtccacggcctatgccgtgcgc
atctatcgcttctatggcaagcatgccctgaccgtggtgcaggagaatccctaccgtctt
gccatggacatccatggcataggcttccttactgcagacgccgtggcgcgcaagctgggc
tttgagaaggattcccccctgcgggccgaagctggtaccctgtataccctcaagaaaatc
accgaggaagggcacgtctattatccccttgagaagctggtggccaagaccgctgccgag
ctggatatccagtacgatctcattgaggatgccattcatgccctgaagcgtgaagagcgg
gtggtgctggaaccgttggaaggcgacgacgaggctgtgtatctcactcgttttcatgcc
tacgaagccggtatttccacgtatctgcgcaggctgctggggtcgcccaagtctgtggag
attccccgctcggacgaagtggtggacaaggtggtgggcgatctcggcataaagcttgcc
gaggctcagcttgaggctgtgcgtactgccgcgcgcgccaaggtcatggtgctgaccggg
ggacccggtaccggtaaaaccaccatcaccaatgccatcatcaaggtgttccgttccctc
aaggccagagtgctgctctgtgccccgacggggcgggccgccaagcgcatgttcgagacc
tccggcgaggaggcgaagaccattcaccgtctgctggagtattctccgcgggaagacggc
ttccagcgcaacgaggataatccccttgcctgcggcctgctggtggtggacgaggcgtcc
atgatggacaccatgctcatgttccacctgctcaaggctgtgccgctgggggccacggtc
atcttcgtgggggacgtgcaccagttgccttccgtcggaccgggcaacgtgctgcgggat
gtcatttcatccggtgtggtggatgtggtggaactgacggaggtattccgtcaggcgcag
gaatcggacatcattaccaacgcgcacaagatcaactgcggcgaggtgccgtatctggaa
gcctccaaggaccagcttacggatttctatttcatcaggcaggatgagccggaccgttgc
gccgccatgatagtggatctggtgaagaaccatatcccccgccggttcggcatggacagg
ttcaatgacattcaggtgcttacccccatgcacaagggatcggccggtgcgggtaatctc
aacctgctgctgcagcaggccctgaatcccagaggggagcttctcaagcggggagagcgc
gagtttcggctggatgacaaggtcatgcagatccgcaacaactacgacaaggatgtcttc
aacggtgacatcggacgtgtctgcgtggtgaatcccaaggaaaaggaaatcaccgtcagg
ttcgatgacgagaagaacgtcatctacgccttcaacgagctggacgagcttgtgcccgcc
tatgccatttccatccacaagtcgcaggggtcggaataccccgcagtggttatcccagtg
ctgacgcagcactatgttttgctgcaacgcaatcttatttacacgggcgttaccagaggc
aagaaactggtcattcttgtgggagcccccaaggcgctgaccatggcggtaaagaacaac
aagatgcagaagcggtatacgcggctggcacagaggcttgccgcccgttaa
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