Desulfovibrio mangrovi: N1030_12050
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Entry
N1030_12050 CDS
T08614
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psyf
Desulfovibrio mangrovi
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyf01011
]
N1030_12050
Enzymes [BR:
psyf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N1030_12050
Peptidoglycan biosynthesis and degradation proteins [BR:
psyf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N1030_12050
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
HTH_23
LysM2_CERK1_LYK3_4_5
SLT_2
LysM2_NFP
HTH_Tnp_1
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
UZP66339
LinkDB
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Position
complement(2662815..2664464)
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AA seq
549 aa
AA seq
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MQKILPIKYSAMLLIGLMLVIALGACTPKQSLIGEEPVVQAPVDEAVCEPGRLNAAGEPD
VPSEDVASLDETPGQDSSPLTAEEQEALNTRLNINIDMDDSDRQVVEQYFKYFTHSRREV
FERYLERAEMYLPYARKVFKEKGLPDEVVYLAFVESGFNPNAYSRAGAAGMWQFMPYTGR
KYGLKYDWWIDERRDPFKATHAAADYLNKLYADFGDWYLAIAAYNAGEGKIGRAMKDTGA
ESFFELTQQNYKLSHKAQLRQETRHYVPKFLAIVKIMRNLKKLGFKPIAEDCGIELAEVR
VKGGTDLLSLANACSMEWKTFSSYNPAFSRQVSPPDHDATVYLPAKHLATAGDFIASAKS
RPYAGWKAYSIKSGDSWYGISRKFNVPVTVLKSVNKSSSNVLRIGQRVMIPGGGSSTAVA
WDMSRAKTRSIAQKRGNYKVQTGDTLSAISRETGVSIQTLMEANGLTAKSMLKVGQKLYV
PDNSFKKTVASRKQAEEVKKSIVYKVRRGESLWSIARKFGVSHQDVMRWNQLDKQSQLHP
GDQLKLFVN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatactacctatcaaatactccgcgatgcttctcatcgggcttatgctcgtt
attgctcttggtgcgtgtactcccaaacagtcccttatcggagaggagccggttgttcag
gctcctgtcgatgaagctgtgtgcgagcccggcaggctgaacgctgccggagaaccggac
gttccgagcgaggatgtcgcctctcttgatgaaactcccggacaggactcctctccgctt
accgctgaagagcaggaagccctgaatacccgtcttaatatcaatattgatatggacgat
agtgaccgccaggttgttgagcagtatttcaagtactttacccattcccgtcgtgaagtg
ttcgagcggtatctcgaacgggcggaaatgtatcttccctatgcccgcaaggtgttcaag
gaaaaaggcctgccggatgaggtggtctaccttgcctttgtggagagcggcttcaacccc
aatgcctattcgcgcgccggtgccgccggtatgtggcagttcatgccctacaccggtcgt
aagtacggcctgaagtatgattggtggattgacgaacgtcgtgaccccttcaaggcaacc
catgcggctgcggactatctgaacaaactgtatgccgattttggcgactggtatctggcc
attgccgcatacaatgcgggcgagggcaagattggtcgcgccatgaaagataccggcgct
gaaagcttctttgaattgacccagcagaactacaagctgagccataaggcccagctgcgg
caggagacccgccattacgtgcccaagtttctcgccattgtgaagatcatgcgcaacctc
aagaagcttggcttcaaacccattgccgaggattgcgggatcgaactcgccgaggttcgc
gtcaagggcggtacggacttgctgtccctcgccaatgcctgcagcatggagtggaagacc
ttctcctcctacaatcctgcattcagccgtcaggtcagcccgccggatcatgatgccaca
gtctatctgccagccaagcatctggccacggcaggcgattttatcgcctccgccaagtcc
agaccttatgcaggttggaaggcttattccatcaagtccggtgattcttggtatggcatc
agccgtaaattcaatgtgccggttactgtgctgaaaagtgtgaacaagagttccagcaat
gtgttgcgcatcgggcagcgtgtgatgatccccggtggcggttccagcacggctgtggct
tgggacatgtctcgtgccaagactcgctccattgcgcagaagcgcggcaactataaggtg
cagaccggagataccctgtcggccatctcgcgggagaccggcgtgagcatccagactctg
atggaagccaacgggcttaccgcaaagtccatgctcaaggtcggccagaagctgtatgtt
cccgataactccttcaagaagaccgttgcctcgcgcaagcaggccgaagaggttaagaag
tccattgtctacaaggtgcgccgcggagagtctctgtggtccattgcccgcaagttcggc
gtatcccatcaggatgtgatgcgctggaaccagttagacaagcagagtcagctgcacccc
ggcgaccagctcaagctgtttgtgaactaa
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