Desulfovibrio mangrovi: N1030_13240
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Entry
N1030_13240 CDS
T08614
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psyf
Desulfovibrio mangrovi
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyf03032
]
N1030_13240 (gyrB)
03400 DNA repair and recombination proteins [BR:
psyf03400
]
N1030_13240 (gyrB)
Enzymes [BR:
psyf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N1030_13240 (gyrB)
DNA replication proteins [BR:
psyf03032
]
Prokaryotic type
DNA Topoisomerases
N1030_13240 (gyrB)
DNA repair and recombination proteins [BR:
psyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N1030_13240 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UZP66567
LinkDB
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Position
complement(2938802..2941207)
Genome browser
AA seq
801 aa
AA seq
DB search
MTSAGSKQQYTANSITVLEGLSAVRKRPAMYIGSTDVRGLHHLVYEVVDNSIDEAMAGFC
DKITVKVHLDNSVTVRDNGRGIPVDIHPKEGRPAVEVVMTVLHAGGKFDSDTYKVSGGLH
GVGVSCVNALSEYLEVTIDRDGYRHHQRYERGVPVKGVERIGESDRRGTTVRFRPDEEIF
ETNQFVYDVLKKRFEELAYLNSGLTIEFLDERTGDTDTFFAEGGIRQFVKDLNSGEGGIH
SIIYGSGNGTGDQENIFVEYAIQYNAGYKENFLTFANNIRTKEGGTHLQGFKTALTRAIN
TYIQGSDLPKKLKIKLSGDDVREGLTGVISVKIPQPQFEGQTKTKLGNSEVAGLVAGLCY
DHLMTFFGENPKDAKMVIEKAVDAARARDAARKAKDLVRRKGALGDNSLPGKLADCQSKD
PAESELFIVEGDSAGGSAKQGRNPGTQAILPLRGKILNVEKTRFDKMLANKEVKALITAM
GAGIGEEDTDYDKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQYPELITKGFLYIAQPPL
YRAHSSKFEKFIKDDAELNAFLLNRIADDVVLHGGNGVTSTGMQLKELLKVIETIQGKIA
EVENINISQELFLTFLDYPVRLFPENFVHESENGFGEFLQERGYTVRHDIEEDEIERRVW
LVFEDQNGHRTRIGTEFFNSKLYKQPYIALDDIRKMFGGLTFRAVRKEVETELPDIFSVL
DYVLQEARKGISIQRYKGLGEMNPEQLWVTTMNPENRILLQVTVEDAEDASDIFEQLMGD
RVEPRREFIERNALSVHDLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgctggaagcaaacagcagtatactgctaacagcattaccgttcttgagggg
ctttcggctgtccgcaagcgccccgccatgtatatcggcagtacggacgtgcgcggcctg
caccaccttgtgtacgaagtggtggacaactccatcgacgaagccatggccggcttctgc
gacaagatcaccgtcaaggtgcatctggataacagcgtcaccgtgcgcgataacggccgt
ggcattcccgtggacatccatcccaaggaaggacgtcccgcggtggaagtggtcatgacc
gtgctgcatgcaggcggcaagttcgacagcgacacctacaaagtttccggcggtctgcac
ggcgtgggtgtttcgtgtgttaacgcgctgtccgaataccttgaggtgaccattgaccgc
gacggctaccgccatcatcagcggtatgaacgcggcgtgcccgtgaagggtgtggaacgc
atcggcgaaagcgaccggcgcggcaccactgtgcgcttccgtcccgacgaggagatcttc
gagaccaaccagttcgtctacgacgtgctcaagaagcgcttcgaagaactggcctatctc
aactccggcctgaccatcgagtttcttgatgagcgcaccggcgataccgacaccttcttc
gcggaaggcggcatccgtcagttcgtcaaggacctgaactccggcgaaggcggcatccat
tccatcatctacggttccggcaacggtaccggcgatcaggaaaacatctttgtcgaatac
gccattcagtacaacgcagggtacaaggaaaacttcctcacctttgcgaacaacatccgc
accaaggaaggcggcacgcacctgcagggcttcaagaccgcgctgacccgtgccataaac
acctatattcagggatcggatcttcccaagaagctcaagatcaagctttccggcgatgat
gttcgtgaaggcctgaccggcgtcatcagcgtgaagattccccagccccagttcgaaggg
cagaccaagaccaagctcggtaacagcgaagtggccggtctggtggccggtctgtgttac
gaccatctcatgaccttcttcggcgagaaccccaaggacgccaagatggtcattgaaaag
gccgtggacgccgcccgcgcacgcgatgccgcccgcaaggcaaaggatcttgtgcgacgc
aagggtgcccttggcgacaactccctgcccggcaagctggccgactgccagtccaaggat
cctgccgaatccgaactgttcatcgtggaaggtgactccgctggtggttctgccaagcag
ggcagaaaccccggcacacaggccattcttccgctgcgaggcaagattctgaacgtggag
aagacccgcttcgacaagatgctggccaacaaggaagtgaaggccctcatcactgccatg
ggcgcaggcatcggcgaagaggatacggattacgacaagctgcgctaccacaagatcgtc
atcatgacggacgccgacgtggacggcgcgcacatccgcacgctgctcctgaccttcttc
ttccgtcagtatcccgaactgatcacgaagggctttctgtacatcgcgcaaccgccgttg
taccgcgcccattcctccaagttcgagaagttcatcaaggacgatgccgagctcaacgcc
ttcctgctgaaccgcattgcggacgacgtggtgctgcacggcggcaacggcgttacctcc
accggcatgcagctcaaggaactgctcaaggttattgaaaccattcagggcaagatcgcc
gaggtggagaacatcaacatcagccaggaactgttccttaccttcctggattaccctgtg
cgtctcttccctgagaacttcgtgcatgagagcgagaacggcttcggcgagttcctgcag
gagcgcggttacaccgtgcgtcatgacatcgaggaagacgagatcgagcgtcgcgtctgg
ctggtctttgaggaccaaaacgggcaccgcacccgcataggtaccgagttcttcaactcc
aagctctacaagcagccctacatagcccttgatgacatccgcaagatgttcggcgggctc
accttcagggctgtgcgcaaggaagttgaaacggaactgcccgacatcttctccgttctg
gactatgtgctgcaggaagcccgcaagggcatcagcattcagcgatacaaaggtcttggt
gaaatgaaccccgaacagctctgggtgaccaccatgaatcctgagaatcgcatcctgctt
caggtgaccgtggaagacgccgaggatgccagcgacatcttcgagcagctgatgggcgac
agggtagagccccgtcgtgagttcatcgaacgcaacgccctgagcgtgcatgatctggat
atttaa
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