Desulfovibrio mangrovi: N1030_14025
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Entry
N1030_14025 CDS
T08614
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyf
Desulfovibrio mangrovi
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyf03032
]
N1030_14025 (topA)
03400 DNA repair and recombination proteins [BR:
psyf03400
]
N1030_14025 (topA)
Enzymes [BR:
psyf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N1030_14025 (topA)
DNA replication proteins [BR:
psyf03032
]
Prokaryotic type
DNA Topoisomerases
N1030_14025 (topA)
DNA repair and recombination proteins [BR:
psyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N1030_14025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
ETF
Zn_ribbon_recom
Toprim_4
Lar_restr_allev
HMBD
Zn_ribbon_RPB9
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UZP66718
LinkDB
All DBs
Position
complement(3133966..3136233)
Genome browser
AA seq
755 aa
AA seq
DB search
MGKDLIIVESPAKVKTIKKFLGRNYMVHASVGHVRDLPTKDLGVDEAKDFKPKYQVIQGK
QKVVNALRDAAAGADNVYLAPDPDREGEAIAWHVAELIKKENQNISRIQFNEITARAVRE
ALEHPRPLNENLFDAQQARRILDRLVGYKLSPLLWKKVKRGISAGRVQSVALRLIVDREA
ERHAFTPEEYWTLRVELSGATPPPFRAELHKVDGKKPVVGDGDTAAAIETAVKEAQFTVE
KVEEKKRQRQPLPPFITSTLQQLASQRLGYSAKRTMSIAQRLYEGVELGEQGTVALITYM
RTDSVRIADEAQQAALSLIGDMYGKEYLPEKPRFYKTKSAAQDAHEAIRPVDVTLTPDMV
QNLLPREQHSLYRLIWQRFVASQMASAEFHDTTVTVTAANTHWRAKGERMLFPGFLAVSP
QKGTESEELPKLEEGQVVTLTNFEKEQKFTQPPPRYTEASLVRELEEKGIGRPSTYASII
STLIDRDYTSLVDKHFVPTDLGRVVCEKLSRHFVTLMDVGFTAQMEDALDKVAEGEQNWV
DLLKDFVQDFDPTLEKASSEMEAVKQGLTTEVNCSECGKPMIIKFGKAGTFLACSGYPEC
KNTTNFTRDEDGNIQIVERPQEEPEKAGTCPECGKDLVVKKARTGSRFIACSGYPDCKHT
EPFSTGVKCPRCETGMLVEKSSKRGKVFYSCNQYPKCDYALWDWPVAEPCPQCDSKVLTI
KTTKARGKHIACPEKSCRYTRSLEGGDSGDESGEE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagacctgattatcgtggaatcaccggccaaggtgaaaaccatcaagaaattc
ctcgggcgcaactatatggtgcacgcaagcgtgggccacgtacgcgatctgcccaccaag
gaccttggcgtggatgaagcaaaggacttcaagcccaagtatcaggtcatacagggcaag
cagaaggtcgtgaacgccctgcgcgatgccgcagccggtgcggacaatgtctatctcgca
cccgaccccgaccgcgagggagaggccattgcatggcacgtggccgagctgatcaagaag
gaaaaccagaacatcagccgcatccagttcaacgaaattaccgcccgcgccgtgcgcgaa
gcgctggaacacccgcgcccgctgaacgagaatctcttcgacgcccagcaggcccgacgc
attctggaccgccttgtgggctacaagctttcccccctgctctggaagaaggtaaagcgc
ggcatctccgccggacgcgtgcagtccgtggccctgcgccttatcgtggaccgcgaggcc
gagcgccacgccttcactcccgaagagtactggaccctgcgcgtggagctgtccggcgcc
accccgccccccttccgtgcagagctgcacaaggtggacggcaagaagcccgtggtgggt
gacggcgacaccgccgccgccattgagaccgccgtcaaggaagcgcagttcaccgtggaa
aaggtggaagagaaaaagcgccagcgccagccgctgccgcccttcatcacctccaccctg
cagcagctcgccagccagcggctgggctattccgccaagcgcaccatgtccattgcccaa
cgcctctatgaaggcgtggaactgggcgagcagggcaccgtggcgctcatcacctatatg
cgtaccgactccgtacgcattgcggacgaggcgcagcaggccgcgctttccctcatcggc
gacatgtacggcaaggaatacctgccggaaaagccccgcttctacaaaaccaagtccgcc
gcacaggacgcgcatgaagccatccgccccgtcgatgtgaccctgacgccggatatggtg
cagaacctgctcccccgcgagcagcacagcctgtaccggctcatctggcaacgctttgtg
gcctcgcagatggcctctgccgaattccacgacaccaccgtgaccgtgactgccgccaac
acccactggcgcgccaagggcgagcgcatgctcttccccggcttccttgcggtttccccg
cagaagggtacggaaagcgaagagctgcccaagctggaagaagggcaagtcgtcaccctg
accaatttcgagaaggaacagaagttcacccagccgcctccgcgctacacggaagcctcg
ctagtgcgtgagctggaagaaaaaggcatcggccgtccttccacctacgcgtccatcatc
tccacgctcatcgaccgcgactacacctcgctggtggacaagcacttcgtgcccaccgac
cttggccgcgtggtctgcgaaaagctcagcaggcactttgtcaccctcatggacgtgggc
ttcaccgcgcagatggaagacgccctcgacaaggtggcggaaggcgaacagaactgggtg
gacctgctcaaggacttcgtgcaggacttcgaccccacgcttgaaaaggcgtcttctgag
atggaagccgtgaaacagggtctgaccaccgaagtgaactgctccgagtgcggtaagccc
atgatcatcaagttcggcaaggcgggtaccttccttgcctgttccggctaccccgagtgc
aagaacaccacgaacttcacccgcgatgaagacggcaacatccagattgtggaacgcccg
caggaagagcccgaaaaggcgggcacctgccccgagtgcggcaaagacctggttgtgaag
aaggcccgcaccggcagccggttcattgcctgctccggctatccggactgcaagcacacc
gagccgttctccacgggcgtgaaatgcccccgctgcgaaaccggcatgctggtggaaaaa
agctccaagcgcggcaaggtgttctactcctgcaaccagtaccccaagtgcgactacgcc
ctctgggactggcccgtggccgaaccctgcccgcagtgcgattccaaggtgctgaccatc
aagaccaccaaggcgcgcggcaagcacattgcctgccctgaaaagagctgccgttacacc
cgctcgctcgaaggcggcgattccggcgacgagagcggcgaagaatag
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