Desulfovibrio mangrovi: N1030_14760
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Entry
N1030_14760 CDS
T08614
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf02020
Two-component system
psyf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N1030_14760
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N1030_14760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyf03021
]
N1030_14760
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psyf02035
]
N1030_14760
Transcription machinery [BR:
psyf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N1030_14760
Bacterial motility proteins [BR:
psyf02035
]
Flagellar system
Flagellar assembly proteins
Stator
N1030_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Alpha-E
UPF0122
GerE
DUF3562
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UZP69181
LinkDB
All DBs
Position
complement(3292942..3293757)
Genome browser
AA seq
271 aa
AA seq
DB search
MEISSSSGKSSSSGNSPAGGKEPWELLESGAVAWPDMSPRQQESVVRHYAPKIKFLALRL
KAKLPKNVELGELISAGTLGLMESLGKFDPKMGIKFDTYAESRIRGAMLDELRRLDWFPR
SLRHRVRQLEEAIHKIESDKGRVPTEEELQQATGLDEKEVRIGLEALQNQLCLSLDAIQE
TFSTEGRDSIDGEPFQATALQELIERVASLIDQLTPREKLVLSLYYSDELNMRETAEVMG
ITEGRVSQLHTQALQRLRREFHTSYGTTESI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcaagttcttctggaaaaagctcctcttcaggcaatagtcctgcaggcggc
aaagagccgtgggaactgcttgaatctggtgccgttgcctggccggacatgtctccccgc
cagcaggagtccgttgtccggcactatgcgcccaagatcaagttccttgccctgcgcctg
aaagccaaactacccaagaacgtggagcttggcgaactcatcagcgcaggcacgctcggc
ctcatggaatcgcttggcaaattcgatcccaagatgggcatcaagttcgacacctatgcg
gaaagccgcatacgtggcgccatgcttgacgaattgcgaaggctggactggttcccccgc
agcctgcgccacagagtgcggcaactggaagaagccatacacaaaatagaaagcgacaag
ggccgcgttcccacggaagaggaactgcaacaggccaccggacttgatgaaaaagaagtc
cgtatagggcttgaggccctacagaatcagctttgcctgagccttgacgccattcaggag
accttttccactgaaggacgcgactccattgacggagaaccttttcaggctactgcacta
caggaactgattgaaagggttgcatcacttatcgatcaattgacacctagggaaaagctg
gtattgtcactctattatagtgacgaattaaatatgcgtgaaaccgccgaagttatgggc
ataaccgaaggtcgtgtatcgcagttgcatactcaggccctgcagcggttgcgccgggaa
ttccatacatcgtatggcaccaccgagagcatctaa
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