Desulfovibrio mangrovi: N1030_16635
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Entry
N1030_16635 CDS
T08614
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf03030
DNA replication
psyf03430
Mismatch repair
psyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N1030_16635
03430 Mismatch repair
N1030_16635
03440 Homologous recombination
N1030_16635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyf03032
]
N1030_16635
03400 DNA repair and recombination proteins [BR:
psyf03400
]
N1030_16635
Enzymes [BR:
psyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N1030_16635
DNA replication proteins [BR:
psyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N1030_16635
DNA repair and recombination proteins [BR:
psyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N1030_16635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
UZP67202
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All DBs
Position
3725434..3726207
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AA seq
257 aa
AA seq
DB search
MMSTSASATTGFTGRIAGLLQAVRKGLGRWTGPVHPLLEENYALFADFDQERPIEEYSFV
VLDSELTGLNPSRDEIVSIGAVRVAGFSINPSDTLHLMVRPRGTMHKPATLVHRITPEAV
ADKPPIEDVLPELLRFCNGSLIVGHHVGLDMAFLNRAARRHMGGSLATPCIDTMRLAQAW
EQERWEASFDPFQPSISYNLRDLAAHYGLPRFQEHDALEDAMQAAYLFVYLVRKMRGGSI
RTLKDLFMAGRSWRWYM
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtacatcggcatccgccacaaccggtttcaccggcaggatagcagggctgctt
caggcagtccgtaaagggctggggcgctggacaggtcccgtacatccgttgctggaagag
aactatgcactcttcgcggactttgatcaggaacggcccatagaggagtattccttcgtg
gtgctggacagcgaactcacgggcctcaatccttcgcgggacgaaatcgtctccatcgga
gccgtgcgcgtggcaggtttcagcatcaatccttcagacacgctgcacctcatggtgcgt
ccgcgcgggacgatgcacaagcccgccacgctcgtgcatcgcatcacgcccgaagccgtg
gccgacaagccgcccattgaagacgtgctgcccgaactgctgcgcttctgcaacggatcg
ctcattgtggggcatcatgtggggctggacatggcctttctgaacagggctgccagacgg
catatgggcggttcgctcgccacgccctgcatagataccatgcgtcttgcccaggcatgg
gaacaggagcgctgggaagcctcgttcgatcctttccagcccagcatatcctacaacctg
cgtgatcttgccgcgcattacggactgccccgttttcaggagcacgatgcgctggaagac
gccatgcaggccgcctatctctttgtttatctggtgcgcaagatgcgcggcggttccatt
cgcaccctgaaggacctgttcatggcaggcagaagctggcgctggtatatgtaa
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