Psychrobacter sp. P11G5: AK825_02430
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Entry
AK825_02430 CDS
T04411
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyg
Psychrobacter sp. P11G5
Pathway
psyg03030
DNA replication
psyg03410
Base excision repair
psyg03420
Nucleotide excision repair
psyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK825_02430
03410 Base excision repair
AK825_02430
03420 Nucleotide excision repair
AK825_02430
03440 Homologous recombination
AK825_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyg03032
]
AK825_02430
03400 DNA repair and recombination proteins [BR:
psyg03400
]
AK825_02430
Enzymes [BR:
psyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK825_02430
DNA replication proteins [BR:
psyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AK825_02430
DNA repair and recombination proteins [BR:
psyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AK825_02430
NER (nucleotide excision repair)
GGR (global genome repair) factors
AK825_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AMN68719
LinkDB
All DBs
Position
complement(580056..582926)
Genome browser
AA seq
956 aa
AA seq
DB search
MDTNHVDKDQPPFILVDGSYYLFRTYHALPKTMQNSQGLITNAIRGTLNALLKLMRRYHP
THMAVCFDTKSPTFRHAMSEEYKANRPKMDIELAEQIPYIHRLVTALGLPLLRIEGAEAD
DIIGTLAYRAVAEGHHVVISTGDKDMMQLINDCVILEDSFTGKITDSAGVVEKFGINPKQ
MIDFLTLMGDSSDGIKGVPGIGKKTAKDLLNEYGTIDNMLTNVADIKGRAGKNLVEYADD
IPMNAQLATIVTDLEIGQDWQDLKINTDPCAHIDELRALYNELEFRNELASLDHPNHPAN
GSQSVANSQADAESQAQIAKSLQSNTIDNVTDSKSHDRAWHTILDEPAFNSLVKLLESAP
HFVIDTETTSVYWRQAELVSLSFAVKAHEAYYVPLTHSLEGDELTAKQLDRDTVLAKLKP
ILENSKIGKIGQHLKYDAHILSHYDIDLVGAIHASPNNWKMDTMLASYVINAAITRHGMD
DLARHYLQTQTISYEDVAGKGAKQVTFDQVAIDIASDYACEDADITYQLFDVFSKKLNED
ENNAKLLHELEIPTAEILCQMEAHGILIKRSFLNELSKRFDEEIIALEKRAYEVAGEEFN
LGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEAVLSKIDHPLVEIVLEYRGLSKLKSTYT
DALDNVADAETDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAPQGRVI
LAADYSQIELRLMAHFSGDKNLTHAFNEGLDIHAATAAEVLGKDVADVTPTERRNAKAIN
FGLLYGMSAFGLAKQLQMSRNEAQDYIDMYFERYPGVKDYMINTRASAHDRGYVETILGR
KLYTPDITHSNRMVKQGAERAAINAPLQGSAADLIKLAMIAVDKVLPKEQAKMLLQVHDE
LVFEVDTDKVDEISQLITDAMQDVLTTTAVEKGWKVDFAVPLLVETDSGVNWDEAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggataccaaccatgtagacaaagaccagccaccttttattttagtcgatggctcttac
tatctatttcgcacttaccatgccttaccaaaaaccatgcaaaactctcaaggcttaatc
accaacgccatacgtgggacgttaaatgcgctattgaaattaatgcgtcgctatcaccca
acccatatggccgtctgctttgataccaaatcgccgacctttcgtcacgcgatgtcagaa
gaatacaaagccaaccgtccaaaaatggatattgagctggctgagcagattccttacatt
catcgtttggtgacggcactagggcttcctctactccgtatcgaaggcgcagaagctgat
gatatcatcggtacgcttgcctatcgtgccgttgctgaaggccatcatgtggtcatctcg
actggtgataaagacatgatgcagctgattaatgactgtgtgatattagaagacagcttt
acagggaagattactgatagcgcaggcgtggtcgaaaaattcggtattaatcctaagcag
atgattgactttctgaccctcatgggcgattcgtctgacggcatcaaaggcgtaccgggt
atcggtaaaaagactgccaaagacttgcttaatgaatatggcactatcgacaatatgcta
acaaacgtcgccgatatcaaaggacgcgctggcaaaaatctggtcgaatatgccgatgat
attccgatgaatgcgcagctggcaactatcgttaccgatttagaaattggccaagactgg
caagatttaaaaatcaatactgatccttgtgctcacattgatgagctaagggcattgtac
aatgagcttgagtttagaaatgagctggcctcacttgatcatcccaatcatccagccaac
ggctcgcaaagtgtcgccaatagtcaggcggatgctgagtcacaagcgcaaatcgctaaa
tctcttcaatcaaacaccattgataatgtcaccgacagtaaaagccatgatagagcatgg
catacgattttagacgagcccgcttttaacagcttagttaaattattagagtctgcgccg
catttcgttatcgataccgaaaccaccagtgtctattggcgtcaggcggaattggttagc
ttgtcttttgcggtaaaagcgcacgaagcctattatgttccgctcacgcatagcttagaa
ggtgatgagctgactgcaaagcaacttgatcgcgacacagtattagcaaaacttaaacct
attttggaaaattccaaaataggtaaaatcggtcaacatctaaaatatgacgcccatatt
ctcagtcattatgatatcgacttagtaggcgctattcatgccagccctaataactggaaa
atggacaccatgcttgccagctatgtaattaacgccgccatcacccgtcatggtatggat
gatctggcgcgccactatctacaaacacagactatcagctatgaagatgtcgctggtaaa
ggtgctaaacaagtcacctttgatcaagtagctatcgatattgctagtgactatgcttgt
gaagatgccgatattacttatcagctatttgatgtctttagcaaaaaacttaatgaagat
gaaaacaacgccaaactactgcacgagttagaaattccaactgctgaaatactctgccag
atggaagcgcatggtattttgattaagcgttcattcttaaatgagctatcaaaacgtttt
gatgaagaaattatcgctctagaaaaacgcgcttatgaagtggctggagaagagttcaat
ttaggctcaccaaagcagcttggtgagatgctgtttgataagcttggcgtcattggtggt
aaaaaaaccaagtcagggcaatactctactggtgaagcggtattgtcaaaaatcgatcac
ccactagtggaaattgtacttgaatatcgcggtctatctaagcttaaaagcacttatacc
gatgcgcttgataatgtcgcagatgctgagactgatcgcgtgcataccagctatcaccaa
gcgctgaccagtaccggacgtttatcatctactgatcctaacttacagaatattccaatt
cgtaccgccactggtcgcctgattcgccaagcctttattgcgccacaaggtcgcgttatt
ttagcagcggattactcacagattgaattgcgtcttatggcgcatttttcaggcgataaa
aacctgactcacgcctttaacgaagggctagatattcacgcggctactgctgctgaagtg
ttaggaaaagatgtcgctgatgtcaccccgaccgagcgtcgtaatgctaaagccattaac
tttggtctgctctatggcatgagtgcctttggacttgccaagcaactacagatgagccgc
aatgaggcgcaagattacatcgatatgtacttcgagcgttacccaggcgtcaaagattat
atgatcaacactcgtgccagcgcccatgatagaggctatgtcgagactatattaggccgc
aagctctatacacctgatatcacccatagcaatcgtatggtcaaacaaggggctgaacgt
gcggcaattaacgcgccactacaaggatcagctgctgacctaatcaaactggccatgatt
gccgtcgataaagtactacctaaagagcaggcgaaaatgctgctacaagtccatgatgaa
ttagtatttgaagtagatactgataaagtggatgaaattagccaactcattactgatgcg
atgcaagatgtcttgacgaccaccgctgttgaaaaaggttggaaggtagactttgctgtg
ccgttattggttgagactgatagtggtgtgaattgggatgaggcgcattag
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