Psychrobacter sp. P11G5: AK825_04320
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Entry
AK825_04320 CDS
T04411
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
psyg
Psychrobacter sp. P11G5
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyg03016
]
AK825_04320
Enzymes [BR:
psyg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AK825_04320
Transfer RNA biogenesis [BR:
psyg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AK825_04320
Prokaryotic type
tRNA splicing ligases
AK825_04320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AMN67030
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All DBs
Position
complement(1014138..1015370)
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AA seq
410 aa
AA seq
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MQPMTHNIIQDGGTPIRLWTKGVPVDPKAHDQLIKASQMPFIYKWLAVMPDVHVGIGATI
GTVLPTKEAIIPAAVGVDIGCGMMAVQTTLTADDLPDNLRGLRSELEKVIPHGRSKSRGR
GSNRDVGAWSNPDDTVKDGWTTLVDDFNYITQKHPKLKNTNNLKHLGTLGTGNHFVEVCL
DETNQVWIMLHSGSRGVGNAIGRYFIELAREDMRKWFINLPDKDLAYFAEGTEHFDDYWF
AVGWAQRFAFKNREIMMENAIKALRNIITKPFDAKMKAVNCHHNYVDKEEHYGEEVFVTR
KGAVRARVGEYGIIPGSMGAKSFIVRGKGNAESFHSCSHGAGRIMSRTEAKKTFTVDDQI
AQTEGVECRKDAAVIDEIPAAYKDIDDVMKAQSDLVEVVHTLRQVVCVKG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgatgacccataatatcattcaagacggtggaaccccgatcagactttggaca
aagggcgtccctgtcgatccaaaagcgcacgatcagctaatcaaagcctcgcagatgccg
tttatatataagtggctcgcggtaatgcctgacgtgcatgttgggattggcgcgactatc
ggcacggtactgccgaccaaagaagcgatcatccctgccgccgttggcgtcgatatcggc
tgcggcatgatggcggtacaaactaccctgacggctgatgatttgcccgacaacttgcgc
ggtctgcgcagcgagctagaaaaagtgattcctcatggtcgcagtaagtctcgtggccgc
ggctcaaaccgtgatgtcggcgcatggtcaaatcctgatgacacggttaaagacggctgg
acaacgctggttgatgattttaattatataacccaaaagcaccctaagcttaaaaacacc
aataaccttaagcacttgggaacgcttggtaccggcaaccactttgtagaagtgtgcttg
gatgagaccaatcaggtgtggattatgctgcattcaggatctcgcggcgtgggtaatgcc
atcggtcgctactttatcgagcttgcacgtgaggatatgcgtaagtggtttattaatttg
ccggataaagatttggcgtactttgctgaagggactgagcattttgacgactattggttt
gcggtcggttgggcacagcgttttgcttttaaaaaccgtgaaatcatgatggagaacgca
attaaggcactacgtaatattatcaccaagccctttgatgccaaaatgaaagcggtgaac
tgtcaccataactacgtggataaagaagagcactacggcgaggaagtattcgtcactcgc
aaaggcgcggtacgtgcgcgtgtcggtgaatacggtattattccagggtcaatgggcgca
aaatcctttatcgtgcgcggaaaaggtaacgcagagtcgtttcactcttgctcgcatggc
gcaggtcgcatcatgtcacgtactgaagccaaaaagacctttacggtagatgatcaaatc
gcgcagactgagggcgtggaatgccgcaaagatgccgcggttatcgatgagattccagca
gcgtacaaggatattgatgatgtaatgaaagcgcagagcgacttggtggaagtggtacat
actttgcggcaagtggtttgtgttaaaggctaa
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