Psychrobacter sp. P11G5: AK825_06065
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Entry
AK825_06065 CDS
T04411
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psyg
Psychrobacter sp. P11G5
Pathway
psyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AK825_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyg03019
]
AK825_06065
Enzymes [BR:
psyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AK825_06065
Messenger RNA biogenesis [BR:
psyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AK825_06065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
AAA_19
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AMN67325
UniProt:
A0A127GYJ1
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All DBs
Position
1447895..1449049
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AA seq
384 aa
AA seq
DB search
MSNFTTFTDLPLSAPTLRAISDLGFTELTPIQAQILPHTLAHQDAIGQAQTGTGKTATFL
ITIMEALLKRPFGQEEERHLGEPRAVIMAPTRELAQQIFDDCVALTKYTELHSVCIMGGT
NYETQQHELERQYVDILVATPGRLIDLMHKGMVYLDRVEVLVLDEADRMLDMGFIPDIKR
LVGRMPANTDRQSLLFSATFNQDVMNLAYRWLHEPQFVEIEPEHKTSELVDQHFYLLTED
QKLEALQRIITDSAVEKVIVFANRKDQVKRLYHKLRQAHKIVMLSGDVIQQKREKYLQRF
KDGHASILVATDVAGRGIHVDDISHVVNYTLPDQPDDYVHRIGRTGRAGQTGISISFVSE
DDAFNLPALEKHLDTKFSLEQWQQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaattttacgacatttactgatttgccactttcagcgccaacattacgagcaatc
agtgatttgggttttaccgagttaacgcctatccaagctcagatattaccacatacatta
gcgcatcaagacgcgattggacaggcgcaaacgggaacaggcaagactgcgactttcttg
attactattatggaagctttacttaagcgtccttttggtcaggaagaagagcgtcattta
ggtgagcctcgcgccgtgataatggcaccaacacgcgagcttgcgcagcagatttttgat
gattgtgtggcattgaccaaatataccgagctacatagtgtctgtattatgggtggtact
aattatgagactcaacagcatgagcttgagcgccaatatgtagatattttggtggctaca
cctggacgtttgattgatcttatgcataaaggtatggtctatttggatcgtgtagaagta
cttgtgttagatgaagctgaccgtatgcttgatatgggttttatccccgatattaaacgt
ttggttggacgcatgccagctaacactgatcgtcaaagcctgctgttttcagctaccttt
aatcaagatgttatgaaccttgcttatcgctggttacatgagccccagtttgttgaaatt
gagcctgaacacaaaactagtgagctagtagaccagcatttttatttactaacagaagat
caaaagttagaagcgttgcagcgtattattactgatagcgctgtagaaaaagtcattgtc
tttgccaatcgtaaggatcaggtgaagcgtctgtatcacaagcttcgtcaagcgcataaa
attgttatgctatcaggtgacgtgattcagcagaagcgtgaaaaatacttacagcgtttt
aaagacggtcacgcctctatattagtcgcaactgacgtagctgggcgcggtattcatgtt
gacgatatcagtcatgtggttaactataccttgccggaccagccagatgactatgtacat
cgtattggtcgtacagggcgcgctgggcaaacaggtatcagtattagctttgtgagtgaa
gatgatgcttttaatctacctgcattagagaaacacttagatactaagtttagccttgag
caatggcaacagtag
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