Psychrobacter sp. P11G5: AK825_06740
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Entry
AK825_06740 CDS
T04411
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyg
Psychrobacter sp. P11G5
Pathway
psyg03030
DNA replication
psyg03430
Mismatch repair
psyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK825_06740
03430 Mismatch repair
AK825_06740
03440 Homologous recombination
AK825_06740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyg03032
]
AK825_06740
03400 DNA repair and recombination proteins [BR:
psyg03400
]
AK825_06740
Enzymes [BR:
psyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK825_06740
DNA replication proteins [BR:
psyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK825_06740
DNA repair and recombination proteins [BR:
psyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK825_06740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AMN67447
LinkDB
All DBs
Position
complement(1608399..1612112)
Genome browser
AA seq
1237 aa
AA seq
DB search
MAFVHLGIHSEYSITDSIVRIKPLIKAAAADNQRALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMENEDTRLTLLAMDNEGYQNITRIVSLGFTEGRADAANHGVPVIKRSHILEH
AAGVIVLFTEKSDVGQALVGSMPEKADELLAEWQAQFDDRLYFAIKRTNRSGEDTFIQAA
IHSGAKHNIPIIAHNDVRFLEQDDFDAHEARVCIAGSYVLADLNRPQTYSDEQYLKTQAQ
MEHLFSDLPQVINNTLRLATRCNVTLTLGINVLPDFPVPEGETIESFFRAESIRGLNNRL
DKLFPIEERGDNWQDIRQKYDERLEYELEVILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARVQSKSYFLASKLSKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDAIEIWEMAIKLEGVCRNVGKHAGGVLIAPHKITDFSAIYCDDDGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVINAAVENINLRRAKEGKEALVLEDLPLDDKKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATSQGIDEVTSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFELTVVNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVESIVDARRREGPFKDLYDFCRRVDIKKVNKRTLEALVSAGCFDDFAATLRPDLPA
DEAYEIRGALMSQLPSAVQAAEQDRQNREIGMMDLFGEMDGVVAAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPINEYLDEIKRYTSGARLDKLTDTGYNGSCYFAGLIIDIANFGN
RNVIILDDGTSRLEVSCYAERFNRVKEQLKVDEVVIIKGSIRERDGRLFARLDNAMSMVD
ARLRWLKKISIKVHGSDINLLTRLQPLLKSAQAGIIPAPRLAYNNDQDEQDGNSNSAVYD
PAMGGSLYDEDGNDLLVLENDMNQDVLNNGSSYVNNALSNTDASINDNCLPLGLSIYEEY
GIANVGLSEHWRVYPNDDNLQQLKSMINEENIYFHYS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtacaccttggcattcacagcgaatattcgatcaccgattctatcgtgcgc
atcaagccgcttatcaaagctgcggcggcggataatcaacgcgcgctggcgttaactgat
ttatccaacctttatgccacggtgaagttctatcgtgcctgcctaggtgctggtatcaag
ccgattatcggtagcgaagtcatcatggagaatgaagacacgcggctaaccctgctagcg
atggataacgagggctatcaaaacattacccgtatagtatcccttgggttcactgaagga
cgcgctgacgctgccaatcatggtgtgcctgtcatcaaacgcagccatattttagagcat
gcagcaggtgttatcgttctcttcaccgaaaagtcagatgtcggtcaggcgctggtcggc
tctatgccagaaaaagccgatgagctgctggcagaatggcaagcacagtttgatgatcgc
ttatactttgccatcaagcgtaccaatcgatcaggggaagataccttcattcaggctgct
atccactcaggtgccaaacacaatattcctattattgctcataacgatgtgcgcttctta
gagcaagacgattttgatgctcatgaagcgcgcgtttgtatcgcaggctcctacgtgctc
gctgacctcaatcgtccgcaaacttattcagatgagcaatatcttaagacccaagcgcag
atggagcatttattttctgatcttccgcaggttattaataataccttacgtttagcaact
cgctgtaatgtgaccttgacccttggtattaacgtcctgcccgatttccctgtccctgaa
ggcgagacgattgaatcgtttttccgcgcggagtcaatacgaggccttaataatcgattg
gataaactatttccgattgaggaacgcggtgacaattggcaggatattcgccaaaaatat
gatgaacgcttagaatatgagctcgaagttatcttatcaatgggctttcccggttacttc
ttaatcgttatggactttatccgctgggcaaaagccaatggcgtacctgttggaccaggc
cgtggttctggtgctggctcactagtcgcctatgcgttaaacattaccgacctcgatcct
atccattacgatctattattcgagcgtttcttaaaccctgaacgtgtctcaatgcccgat
ttcgatattgacttttgtattgaaggtcgtgaccgcgttattgattatgttgcgcaaact
tatggtcgtgaagcggtctcgcagattatcacctttggtaccatggcggcaaaagcggtg
gtacgagatgtggcgcgggtacaaagtaagtcttactttcttgccagcaaactatctaaa
ttgattccaaaaacccccggtatcacgctcagccaagcgctcgagcaagagccgcagctt
aaagacttaatctccaaccctgacaatatggattatgaagatgccattgagatttgggag
atggcaattaagcttgaaggtgtctgccgaaacgtcggtaaacatgccggtggcgtccta
attgccccgcataaaattaccgattttagcgccatttattgtgatgacgatggtcaccgt
gtcagtcagtttgataaagatgatgtcgaagcggttggtctggtgaagtttgactttttg
ggtctacgtaacttaaccgtcattaatgctgcggtagaaaacatcaacttgcgccgtgct
aaagaaggcaaagaagcgttggtgttagaagacttgccattagatgacaaaaaagcctac
aagctcttgcaagatgccaagaccactgccgtctttcagcttgaaagtatgggtatgaaa
aagtatttggcgaaattacaaccgactaatatcgaagatgtgatcgccatgtgtgcgctc
tatcgtccgggtccgctcgatgctggcatggtagagatgtatatcgaccgtaagcatggt
cgtgaggaagtcatttatgaccatcctaatcttgagccgattttagaaaacaccaacggc
gttattgtctatcaagaacaggtgatgcaaatctcgcaggtgatggcaggctatagctta
ggcggtgcggatatgttacgccgagccatgggtaaaaagaaacctgaagagatggccaaa
cagcgcgacattttcgtcactggtgcaacctcgcaaggtatcgatgaagttacctcaggt
ggcgtctttgatttgatggagaaattcgcgggctacggttttaaccgctcgcattctgcc
gcttatggagtactagcttatcaaaccgcttatctaaaacagtattaccctgctgagttt
atggcagcagtactaacttccgatatgaacaacaccgacaacgtcgtgttctttattaat
gattgccgtgaaaactttgagttaaccgtggtcaatccatcggtgaaccgcagtgagtgg
catttcgtcgccgataccccgaccaatatcatttatggcttgggtgcgattaaaggcgtt
ggtgaaggtgcagttgagtctatcgttgatgcgcgtcgccgtgaaggtccgtttaaagat
ttatatgacttctgccgtcgcgtcgatatcaaaaaagttaataaacgtacccttgaagca
ttagtcagtgccggctgctttgatgattttgcggctaccctacgtcctgacttgccagcc
gatgaagcttacgagattcgcggtgcgttaatgagtcaattaccaagcgccgtacaagcc
gctgaacaagaccgtcagaaccgcgaaattggtatgatggacttatttggtgaaatggat
ggtgtggttgctgcaccgccattggtcatgaccccagaattaatttggggtgataagcac
cgtttaaaagcggagaaaaacaccttaggactgtatttaactggccatccaatcaatgaa
tacttagatgagatcaaacgctatacctcaggcgcacgtctcgataagctaacggacact
ggctataacggcagttgctattttgccggattaattattgatatcgccaattttggtaat
cgtaatgtgattatcttagatgacggaacctcaagactggaagttagctgctatgctgaa
cgttttaaccgcgttaaagaacagttaaaggtggatgaagtggtcatcatcaaaggcagc
attcgtgagcgcgatggtcgtctatttgcccgccttgataatgcaatgagtatggttgat
gcgcgcttgcgttggctgaaaaaaatcagtatcaaagtccacggcagtgatattaatctg
ctgacacgcttgcaaccacttcttaaatcggcgcaagcgggtatcatacctgcgccacgc
ttagcttataacaatgatcaggacgaacaagacggcaatagtaacagtgccgtttacgac
cctgcaatgggtggcagtttgtacgatgaagacggcaatgacttattggtgctagagaat
gatatgaatcaggatgtgcttaataatggcagcagctatgtcaataacgctctgagtaat
actgatgcctcaatcaatgataactgtctaccgcttggtctgagcatttacgaagagtat
ggcattgctaatgtggggctatcggagcattggcgtgtctatcctaacgatgataattta
cagcagctaaaaagcatgattaacgaagaaaatatatattttcattatagttag
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