Psychrobacter sp. P11G5: AK825_07540
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Entry
AK825_07540 CDS
T04411
Name
(GenBank) exonuclease SbcD
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psyg
Psychrobacter sp. P11G5
Brite
KEGG Orthology (KO) [BR:
psyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyg03400
]
AK825_07540
DNA repair and recombination proteins [BR:
psyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AK825_07540
Archaeal homologous recombinant proteins
AK825_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
SMC_N
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMN67577
UniProt:
A0A127GZ43
LinkDB
All DBs
Position
1849312..1853262
Genome browser
AA seq
1316 aa
AA seq
DB search
MRLIELRLKNLNSLKGEWHIDFSDPAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR
LGDITGSTNEIMTQGTGECSAEVIIEIDAKRYQCYWYQHRAHKKAKGNLLPIRHEISEVK
TGKILEEKKSKTSAYIQDLIGMDFNQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA
IYAKISLNVHEKKRFEEEVLGKIQAGVSSLSLLSLEDEKLLAADLESLNQQQSKQRQTFK
ILSEQMQWLDNVQQLQQNLSVFQANFAAARQIQTDFTPEAQRLDIANKALEIDSQFRELI
YSRELVKRLGFEQQNLLSKIPSQQEALAQATTHLNNINTIEKQATDNLQATLPIIAKTRE
LDAEIKQQSHSLADDDQRKNVLVNNTQRLRQEIDNHKQTEQETKAKLSGIEKYFSDYQEL
NDLDTDMATFDSSCSRLKALLEDNVSLAADKLAHDNQSSQLQAHFDKLSKQYDIHKLLIT
EQRKQLASLQQQQAALIKKQSLVSMRGEQEQVDQISGQIAQASFKLQQLSELANQIKKTN
LSLPTLNKELISLEGLIANQQSDIQDAKIKKQEKQEHLNLLQKVAKLEDYIAELEDGSPC
PLCGAHEHPYGKHHPLLDSNNINDNVEQKQSSTIKQTKTQQTQQQIAELETIIDNLEQAL
STYNIEYATKKETLNNQQQQLVPLHQQSEILHGDIQEYIASLFESEKNYSESIVAIINTL
NQINDDINATITNIDHSLSLLDTAKHDLTEHKQSLKTIVVEYENLTESAAKLSTAIETDE
KQQQALSHDINNLTTDIKLNSQKLDGIKDKIAANFSELAPLMTTVSSLTHKYPTDKYKEH
LTTALNAADLSDALKQLHNSFDKQTVMDSADYDYHIEKLRQQRSALNQLKRQFNDRKDSQ
QQLTNTLSSLTAQIETKQIQLSNDETALKELERLIAHKTKAIEQLKQDRKELFADKNTDN
EENQLRSTVDAAKTKQVVAQRQLDSVEQALEQLKIREEQLDTELQSATTTLNTQQSIFSD
LLAESQFVNEAAFVSARLPKEEREALHTRKLAIDNALHQAKLQLDSTQQALEQKLANPMT
DESQETLASQHQQIQIDIDELSQKIGAIDQKLKDNDNQKGEQAAKLFAIDEQKQKLQVWQ
QLHTLIGSADGKKYRTFAQGLTFEVMISHANTQLQKMSDRYLLIHDDSNPLELNVIDNYQ
GGDIRSTKNLSGGEGFIISLALALGLSQMASHNIRVDSLFLDEGFGTLDEESLDIALDTL
TSLQQEGKLIGIISHVQALKDRILTQIKVEKLSGGFSQISGQGCRRVVNATDEKAS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgatagaactacgacttaaaaatttgaactccttaaaaggcgaatggcacatt
gattttagtgaccccgcttttctgaatgaagggatttttgccattactgggcagacgggc
gctggcaagaccaccatcttggatgcgatttgcttagcactttatagtcagacgccaaga
ttgggtgatattaccggctcaacgaacgagatcatgacccaaggtacgggtgaatgctcg
gcagaagttatcatcgagattgatgccaaacgctatcaatgctactggtaccagcatcgc
gctcacaaaaaagccaagggtaacttattaccgattagacacgagattagcgaggttaaa
accggtaagattttagaagagaaaaagtctaagacttccgcctacattcaagaccttatc
ggcatggattttaatcaatttacccgctccatcatgctagcacagggcagttttgccgcg
tttttaaagtcagatattggcgatagagcggcgattttagaaaaaataaccggtactgct
atctatgccaaaatatcgctaaacgtccatgaaaagaaacgctttgaggaagaagtgctt
ggcaagatacaagcgggcgttagtagcttgtcgttattaagtcttgaagatgaaaagtta
ctggcagcagatttggaaagccttaatcaacagcagagcaagcagcgacaaactttcaaa
atcctgagcgagcagatgcagtggctcgataatgtacagcagctacagcaaaacttatcg
gttttccaggctaattttgcagcagcacggcagatacaaacagactttactccagaagcg
cagcgcctagatattgctaataaagcgctagagattgatagccaatttcgagagctgatt
tatagccgagagttggtcaagcggttgggtttcgagcagcaaaatttgctcagtaagatt
ccatctcagcaagaagcgcttgcacaagccacgacccatttaaacaatatcaataccatt
gaaaagcaagccacggacaatctgcaagccactttgcctattattgccaagacacgcgag
ttggatgctgagataaaacagcaatcccattctttagcagatgatgatcaacgtaaaaat
gtattagtcaataatacgcaacggttacgtcaagaaatagacaaccacaaacaaacagaa
caagagaccaaagctaagcttagcggtatagaaaagtattttagcgattatcaagagcta
aatgatcttgatacagatatggcgacctttgatagcagctgtagccgattaaaggcgctg
ctagaagataatgtcagcttagcggcggataagcttgcgcatgacaatcaatccagccag
ctacaagctcatttcgataaattatctaagcaatatgacatacataagttattaataact
gagcaacgtaagcaacttgccagcttacaacagcagcaagccgcacttattaaaaaacaa
tcgcttgttagtatgcgcggcgagcaagagcaagtggatcagatcagcggtcagattgcg
caagccagctttaagttacagcagctgtctgaacttgctaaccaaatcaaaaagaccaac
ctctcgctacctacgctaaacaaggagttaatatctttagaaggactgattgccaatcag
cagtcagatattcaagatgctaagattaaaaaacaagaaaagcaagagcatctgaattta
ctacaaaaggtcgctaagcttgaagactacatagcagaactagaagatggatcgccctgc
ccgttatgcggcgcgcatgagcatccttatggtaagcatcatccgttattagacagtaat
aatatcaatgacaatgtcgagcaaaaacagtcgtccacaataaaacagactaagacgcaa
caaactcagcagcaaatagctgaactagaaaccattattgataaccttgagcaggcttta
tcaacatacaatatcgaatatgctacaaagaaagaaacgcttaacaaccagcaacaacag
ctagtgccactacatcagcaatccgaaatattacatggtgatattcaggagtacatagcc
tcactatttgagtctgaaaaaaattactctgaatcgattgtggcgattatcaatactctt
aatcagataaacgatgatattaatgcgaccatcacgaatatagatcatagcttatcctta
ttagacaccgccaaacatgacctaactgaacataaacagtctcttaaaaccatagttgtc
gaatatgaaaacctaactgaaagtgctgcaaagctcagtactgccatcgaaaccgatgaa
aagcagcaacaagcacttagtcacgacattaacaatctaaccactgatattaagcttaac
tcgcagaagcttgatggtataaaagataagattgctgctaatttctcagagttggcgccc
ctgatgaccaccgtttcatctctaacgcataaatacccaacggataaatataaagagcac
ttaactacagcgctcaatgcggcagacttatctgacgcacttaaacagctgcataacagt
tttgataagcaaacggtaatggacagcgcagactatgactaccatattgaaaaattacgt
caacagcgcagcgctttaaaccagttaaaacgacagtttaacgatcggaaagacagccag
cagcagctaaccaataccttaagcagtttgaccgcgcagattgaaaccaagcaaatacag
cttagcaatgatgaaacagcgctcaaagagctagagcgcttaattgctcataaaaccaag
gctatcgaacaattaaagcaagatagaaaagagctttttgctgataaaaatacggacaat
gaagaaaatcaattacgcagtacggttgacgcagctaaaaccaaacaagtagtagcacag
aggcagctagattctgtagagcaagcattagagcaattaaagattagagaggagcagcta
gacacagagctacagtcggcgactaccacactgaatacgcagcaaagcatcttttctgat
ttactcgcagagtcacagttcgtcaatgaagctgcttttgtgagtgcccgcctgcctaaa
gaagagcgcgaagcactacatacacgtaaattagcgattgataatgcattgcatcaagct
aagttgcagttagatagcacccagcaagcgttagaacaaaaacttgccaaccctatgaca
gatgaaagccaagaaacgcttgcaagccagcatcagcaaatacaaatagatatcgacgag
ttaagtcaaaaaatcggtgcgattgaccaaaagctcaaggataacgacaaccaaaaaggc
gaacaagctgcaaagctctttgcgattgatgagcaaaaacaaaaactacaagtttggcag
cagctacatacgttaatcggttcggctgatggtaaaaaatatcgtacctttgcccaaggc
ttaacgtttgaggtcatgattagtcatgccaatacgcaactgcaaaaaatgagtgaccgc
tatttgctcattcatgatgacagcaatccgcttgagctcaatgtcatcgacaactatcaa
ggcggcgatattcgtagtaccaaaaacctctctggcggcgaaggctttattatcagtctg
gcactggcacttgggctatcacaaatggccagtcacaatatccgcgtcgactcgctattt
ttagacgaaggctttggcacgcttgatgaagagtcacttgatattgcactcgatacctta
accagcttacaacaagaaggtaaattgatcggtatcatctcgcacgtacaggcgttaaaa
gaccgtatcctcacccaaataaaggtcgaaaaactgtctggcggctttagccaaatcagt
ggtcaaggctgtcgccgagttgtcaatgctaccgatgaaaaagcctcgtaa
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